Transcript Information: S_Transcript_137687.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeOrtholog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.248649217617
Replicate 21.1278596902651
Replicate 31.1106969910292
Condition 2: 8 Hour
Replicate 11.8219170999231
Replicate 21.8799872806493
Replicate 32.6122362261007
Condition 3: 24 Hour
Replicate 11.1626128468384
Replicate 21.2061972547636
Replicate 31.0597497649208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137687.p1 GENE.S_Transcript_137687~~S_Transcript_137687.p1 ORF type:5prime_partial len:1428 (+),score=297.51,FAT|PF02259.19|4.7e-51,PI3_PI4_kinase|PF00454.23|7.4e-50,FATC|PF02260.16|2.2e-12 S_Transcript_137687:1-4284(+)
AATCATGAGAACTTGAATGTGAGGTACATGGTCGTTTGTGAGCTCAGCAAACTACTTAACCTCAGAAAGGAGGATTTGGCAGCAGTGATTAACAATGAAACTGATGTAGATATCACTGTTTTAAGCTCGTTGATTACATCCTTATTAAGGGGATGTGCAGAAGAATCAAGGACTTCGGTTGGTCAAAGGCTTAAGATGGTATGCTCTGATTGTTTAGGAGCTTTAGGTGCAATAGATCCTGCCAAGGTAAAGGGATCGTCATGTCAAAGGTTCAAAATTCAGTGCTCAGATGATGATTTAATTTTTGAACTAATACATAAGCACCTCGCCAGGGCATTCAGAGCTGCACCAGATACCAGTATCCAAGACTCTGCTGCACTGGCTATACAAGATTTGCTAGAAACTGCAGGCTGTAAAGCATATTTGGACGAGGATGCAGTTGGGTCCAAGGGCTCAAATGACTGTCAAGTGATAAGGGGTCAACGGTTGTGGGACCGTTTCTCTAATTATGTTAAGGAGATCATAGCACCATGCTTAAATTCTCGATTTCGACTTCAGAATGTGGCAGATTCTACATCTTCTGGGCCTATATATCGCCCATCCTTGTCCTTCAGAAGGTGGATCTCTCTTTGGATTAAAAAACTGATTGGGCATGCTACGGGAACTCGTGCAAGCATCTTCAATGCTTGTCGTGGTATTGTGCGTCATGATATGCAGACAGCAATATATCTGCTACCGTATTTAGTGCTTGATGTTGTTTGCCATGGAGCAGAGGCAGCACGATATGGTGTAACAGAGGAGATATTGTCTGTCCTCAATGCAGCTGCCTCAGAAAACAGTGGTGCAGCAGTTCATGCAATTGGTGGTGGGCAAAGTGAGGTCTGTATTCAGGCTGTATTTACCCTGCTTGATAATATGGGACAATGGGTTGATGATGTGGAACAGGAGATAGCACTTTCTCTTTCATCATTGTCGTCTAAACAGCCTTCCAAGTTTAGTAAAACAAGTACAAACTCTTCAACTGGTTCCGACCAACTCCTCACACAATGCAAATATGTTTCTGAGCTTTTGGATGCAATTCCAAAGGTGACATTAGCGAGGGCTTCATTTAGATGTCAGGCTTATGCTAGATCTTTGATGTACTTTGAGTCACATGTACGGGGAAAATCAGGTTCATTTAACCCAGCAGCTGAGAAGAGTGGCATCTTTGACGATGAAGACATCTCGTTCCTGATGGAAATATATAGTGGTCTGGATGAGCCGGATGGTTTATCAGGGTTGGCAAACTTACGGAAGTCAGTGAGCTTACACGACCAGCTTTTAATAAATAAGAAAGCTGGAAACTGGGCAGAGGTCTTGACTTCCTGCGAGCAGGCCTTGCAGATGGAGCCCATGTCTGTTCAGAGACATTCGGATGTTCTTAACTGCTTACTTAATATGTGCCATTTACAGGCGACAGTCACTCATGTTGATGGACTAATATCAAGGATTCCTCAATACAGGAAAACATGGTGCATGCAAGGAGTGCAGGCAGCGTGGAGGCTTGGCAGGTGGGACTTGATGGATGAGTACCTCAAAGGAGCTGACAAAGAAGGCTTGTTATGCAGCAGTTCTGAGAGTAACGCTTCATTTGAATTGGATGTCGCTAAGATCCTTCAGTCAATCATGAAAAAGGATCAGTTTGCAGTTGCTGAGAAAATTGCATTGTCAAAGCAAGCTCTAATTGCTCCACTAGCTGCTGCGGGCATGGACTCTTATACACGGGCTTATCCTTTTGTAGTAAAGCTTCAGCTATTGAAAGAGCTGGAAGAATTTCATGATCTACTTGTGGGTGAATCATTCTTGGAAAAACCTTTTAATCTTGGAGATCCAATATTCAAGAAAGCTTTAGGGAATTGGGAGAACCGGTTGAGATATACGCAGCCGTCTCTTTGGGCGAGGGAGCCACTCTTAGCTTTCAGGAGACTTGTTTTTCATGCCAGTGGTCTGGGTGCGCAAGTTGGAGAATGCTGGCTTGAATATGCAAAACTCTGTCGCTCTGCTGGTCATTACGAGACTGCTAATCGAGCAATTCTTGAGGCAAAATCATCTGGTGCACCTAATGTCCACATTGAAAAGGCCAAGCTTCTGTGGAGCATGAAGCGATCTGAGGGTGCAATTGCTGAATTGCAGCAGTCTCTCTTAAACATGCCGCTGGAGGTTGTTGGATCTGCTGCAATATCATCTATTACTAGCCTTTCTTTGGTTCCACTGAATCCACAACCCATTCATCGTGATACTCAAGCGCTAAATGAAAATCTCAATATTGCAAAAACTCTACTTTTGTACTCAAGGTGGATCCATTATACAGGGCAGAAGCAGAAAGAAGATGTGATGAGTCTTTACTCTAGGGTGAGGGAATTGCAACCTAAGTGGGAGAAAGGGTACTTTTATGTTGCTAAATATTGTGATGAAGTACTAGCAGATGCTAGAAAACGTCAGGTGGAGCACATTGATACTAATCCAAAGATACCACCTGCTGTTGGTGCTGTCTCTAGTAATTTGACTAGTGAGAAGCCTTGGTGGGTTTATCTTCCTGAGGTTCTGTTATTTTATGCTAAAGGCCTTCACAGGGGTCACAAGAATCTTTTTCAAGCACTTCCAAGATTGTTGACCCTCTGGTTCGACTTTGGATGCGTATATCAGCAATGTGGTTCATCATTGAATAAAGATCTGAAGAGTGTCCATGTGAAGGTTATGAGTATAATGCGAGGATGTTTAAAGGATTTGCCTACTTACCAATGGCTAACTGTTCTACCACAGCTGGTCTCTAGAATATGCCACCAAAATGAAGAGATTGTTCGATTGGTAAAACACATAATAACCTCTGTGCTCCGGCAGTACCCTCAGCAAGCTTTATGGCTCATGGCAGCTGTGTCTAAATCCACTGTTCCTTCAAGAAGACAAGCAGCTGCAGAGATCATGCAAGCAGCACGCAAGGGGTGCAGTCCACAAAATGGGCACAGTGATTTATTTGCGCAGTTTACCAGCCTAATTGATCATCTGATTAGGTTGTGCTTTCATGCAGGCCAACCTAAGGCAAGGACAATTAATATCTTGACTGAATTTAGTGCCCTGAAGAGAATGATGCCTCTAGGAATTATTATGCCCATACAGCAATCACTCAATGTTAAGTTGCCAACAAGTGCTTCAACTTCAGTGGATGCATCTGATATCTTTTCAGCTATTGATCTTCCAACAATATCAGGAATAGGTGATGAAGCTGATATTCTTTCATCTCTTCAGCGACCAAAAAAAGTTGTTCTTGTCGGAAGTGATGGTACTGAACGAGCATTCCTTTGTAAACCCAAAGACGATCTAAGGAAAGATGCCCGCATGATGGAATTCAATGCTATGATAAATCGTCTGCTGTCAAAATGTGCTGAAAGCCGTCGCAGGAAACTCTATATTCGCACTTTTGCTGTAATTCCTCTTACTGAGGATTGTGGCATGGTGGAATGGGTGCCTCACACTCGTGGTCTCCGACATATTCTTCAAGATATTTATATAACACGTGGAAAATTTGATAGACAGAAAACAAATCCTCAAATTAAACGGATTTATGATCAGTGCCAAGGGAAAATGCCAGAAGATGAAATGTTGAAGAGCAAAATTCTTCCAATGTTTCCCCCAGTTTTCCACAAGTGGTTTTTAACTACTTTCTCTGAGCCTGCTGCCTGGTTCAGAGCCAGGGTTGCATATGCACATACTACTGCAGTGTGGTCCATGGTGGGCCACATTGTAGGCCTTGGAGATCGGCATGGGGAAAACATCCTATTTGATTCTACTACTGGAGATTGCGTCCATGTTGATTTTAGTTGCTTGTTTGACAAAGGCTTACTGTTAGAAAAGCCTGAGCTTGTGCCTTTCCGGTTGACCCAGAACATGATTGATGGACTTGGAATTACTGGGCATGAGGGAGTATTCTTAAAGGTCTGTGAGATCACTCTTTCAGTTTTGAGGACCCACAGGGAGACTTTGATGAGTGTTCTTGAAACTTTCATCCATGATCCTCTTGTAGAGTGGACAAAATCTCACAAGTCAAGTGGGGTTGAAGTTGAGAACCCGCATGCACAGCGGGCCATCAGTAACATCGAAGCAAGGCTGCAAGGGATTGTTGTTGGGGTTGCAGCAGCACCATCTTTGCCTTTAGCTGTGGAGGGCCAAGCTCGTCGTTTGATAGCTGAAGCAGTTTCTCATAAGAATCTTGGCAAGATGTATATATGGTGGATGCCTTGGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137687.p1 GENE.S_Transcript_137687~~S_Transcript_137687.p1 ORF type:5prime_partial len:1428 (+),score=297.51,FAT|PF02259.19|4.7e-51,PI3_PI4_kinase|PF00454.23|7.4e-50,FATC|PF02260.16|2.2e-12 S_Transcript_137687:1-4284(+)
NHENLNVRYMVVCELSKLLNLRKEDLAAVINNETDVDITVLSSLITSLLRGCAEESRTSVGQRLKMVCSDCLGALGAIDPAKVKGSSCQRFKIQCSDDDLIFELIHKHLARAFRAAPDTSIQDSAALAIQDLLETAGCKAYLDEDAVGSKGSNDCQVIRGQRLWDRFSNYVKEIIAPCLNSRFRLQNVADSTSSGPIYRPSLSFRRWISLWIKKLIGHATGTRASIFNACRGIVRHDMQTAIYLLPYLVLDVVCHGAEAARYGVTEEILSVLNAAASENSGAAVHAIGGGQSEVCIQAVFTLLDNMGQWVDDVEQEIALSLSSLSSKQPSKFSKTSTNSSTGSDQLLTQCKYVSELLDAIPKVTLARASFRCQAYARSLMYFESHVRGKSGSFNPAAEKSGIFDDEDISFLMEIYSGLDEPDGLSGLANLRKSVSLHDQLLINKKAGNWAEVLTSCEQALQMEPMSVQRHSDVLNCLLNMCHLQATVTHVDGLISRIPQYRKTWCMQGVQAAWRLGRWDLMDEYLKGADKEGLLCSSSESNASFELDVAKILQSIMKKDQFAVAEKIALSKQALIAPLAAAGMDSYTRAYPFVVKLQLLKELEEFHDLLVGESFLEKPFNLGDPIFKKALGNWENRLRYTQPSLWAREPLLAFRRLVFHASGLGAQVGECWLEYAKLCRSAGHYETANRAILEAKSSGAPNVHIEKAKLLWSMKRSEGAIAELQQSLLNMPLEVVGSAAISSITSLSLVPLNPQPIHRDTQALNENLNIAKTLLLYSRWIHYTGQKQKEDVMSLYSRVRELQPKWEKGYFYVAKYCDEVLADARKRQVEHIDTNPKIPPAVGAVSSNLTSEKPWWVYLPEVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGCVYQQCGSSLNKDLKSVHVKVMSIMRGCLKDLPTYQWLTVLPQLVSRICHQNEEIVRLVKHIITSVLRQYPQQALWLMAAVSKSTVPSRRQAAAEIMQAARKGCSPQNGHSDLFAQFTSLIDHLIRLCFHAGQPKARTINILTEFSALKRMMPLGIIMPIQQSLNVKLPTSASTSVDASDIFSAIDLPTISGIGDEADILSSLQRPKKVVLVGSDGTERAFLCKPKDDLRKDARMMEFNAMINRLLSKCAESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDIYITRGKFDRQKTNPQIKRIYDQCQGKMPEDEMLKSKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLLLEKPELVPFRLTQNMIDGLGITGHEGVFLKVCEITLSVLRTHRETLMSVLETFIHDPLVEWTKSHKSSGVEVENPHAQRAISNIEARLQGIVVGVAAAPSLPLAVEGQARRLIAEAVSHKNLGKMYIWWMPWF*

Click here to download the sequence:
Link to NCBI Protein BLAST