Transcript Information: S_Transcript_138134.p1


Annotated TAIR IDAT5G28823.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Zinc knuckle (CCHC-type) family protein (TAIR:AT2G07760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10837849-10839826 | Reverse length=568
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52439411300848
Replicate 20.32605107720465
Replicate 30.36340366667193
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.31501252618199
Condition 3: 24 Hour
Replicate 10.21522052700093
Replicate 20.11164439200171
Replicate 30.12424652416313


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138134.p1 GENE.S_Transcript_138134~~S_Transcript_138134.p1 ORF type:complete len:203 (+),score=20.78,DUF4283|PF14111.2|5.6e-30,DUF4283|PF14111.2|2e+03 S_Transcript_138134:443-1051(+)
ATGCCCACACTGTATTTACACGAAGAGGGTTACTTCCTCATTCGTTTTAATGGGAAAAAGGATATGGAGAATATAATTGCGTCTGGCCCATACTCGATAAATAGGAGGCCTATGATTTTGAAGGTATGGACACCAAATATGGACTTCAATGCAACATTCTTGTCTGAGATACCGGTCTGGCTCAAGTTTCCTAATCTGCCTATTGCTTACTGGGTTACTGACTCAATTAGTAGAATAGCAAGCTGTGCTGGGAGGCCTCTGCTTGCTAATGAATGTACTACACAGCAGACCAGGATTTCTTATGCCCGGGTTTTGGTTGAGGTTAATGTGACTCAACCTTTACCAACAAATGTGCAGATTGAGGATCCGTTTGGTGGTGTAGTCAATCGGCCTATAGAGTATGAATGGATCCTGCGTTCTGTTAGAAATTCCAAAAGCTTGGGCACAACTGTAATACAGATAACCCAACCACCAATTATGCTGGCCAAAAGAAGAGAACAAGAAAGAGATGGAGAAAAAAACAAACACATGCTACAGACCAACCACTGGAAGACACTGATTTCCCAGGACAAGGGGATAACCTGGATCCTATATTGGAGGAGAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138134.p1 GENE.S_Transcript_138134~~S_Transcript_138134.p1 ORF type:complete len:203 (+),score=20.78,DUF4283|PF14111.2|5.6e-30,DUF4283|PF14111.2|2e+03 S_Transcript_138134:443-1051(+)
MPTLYLHEEGYFLIRFNGKKDMENIIASGPYSINRRPMILKVWTPNMDFNATFLSEIPVWLKFPNLPIAYWVTDSISRIASCAGRPLLANECTTQQTRISYARVLVEVNVTQPLPTNVQIEDPFGGVVNRPIEYEWILRSVRNSKSLGTTVIQITQPPIMLAKRREQERDGEKNKHMLQTNHWKTLISQDKGITWILYWRRM*

Click here to download the sequence:
Link to NCBI Protein BLAST