Transcript Information: S_Transcript_138312.p1


Annotated TAIR IDAT3G25070.1
Annotated Gene NameRPM1 interacting protein 4
Annotated Gene Symbol(s)RIN4
Annotation TypeHomolog
Chromosome Positionchr3:9132458-9133747 | Forward length=211
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.5580923507912
Replicate 27.0600926584047
Replicate 35.7541336580834
Condition 2: 8 Hour
Replicate 115.524884150873
Replicate 214.228495734866
Replicate 313.897932638448
Condition 3: 24 Hour
Replicate 16.9903627169901
Replicate 25.9832462561557
Replicate 34.5399679929209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138312.p1 GENE.S_Transcript_138312~~S_Transcript_138312.p1 ORF type:5prime_partial len:250 (-),score=63.99,AvrRpt-cleavage|PF05627.7|0.006,AvrRpt-cleavage|PF05627.7|0.043,AvrRpt-cleavage|PF05627.7|3.9e-12 S_Transcript_138312:360-1109(-)
GCTGCAATCAAACCTGAGCCACAAGTAGCACAGTCCAAGGTACCACAGTTTGGCGCTTGGGAAGGGGAAGGGGAAGCTCAGTACACTATGTGCTTTGAAAATGTTCGGAAGAATAAGAATGGCATCGCTACCACAGAGGAGCCTTCTAAGGCAAATCAACCAAACCGGGGCATGAGTCCACCACAGAATGAGCCTCAAGCTGAAAAGCCTCGTTCTAAGGTGCCCCAGTTTGGCGCTTGGGATGGGGGAGAGAATGTTCAATACACGGCTTACTTTGATGGTGCTAGGAAGAATAAAGAGGAAACATTCGAGCCCCAGCTGAATCGTGATGTTGCTGATAGGTCTAGGCCGCCTTCTGCTGGAGGAGGGGCTAGGCCCAAGCCTGAGCAGATAGGGACCAAGGAAGGAGGTGATTCGAGAAATGCAAGCCGTGGTTCTGAAAGCTCTCAGAAGCCAGGCCGACCAGCTCTTGGGGGTCAGTCACCGCACAATTCAAGAGGGAAGCCTCAACCAAAACCTGTTAGTCGAGGGAGTCAGAGTTCACAGCCTGAGAAAGGGACAGCCATTCCACAATGGGGTGTATGGAACACAGATCCAGCACAAGCTGAGGGTTTTACAGGTGCATTCACGAGGGCTCGGGAGGATAAAATGACACCGCAAAACAGAAACACTCCCTCTTCTTATCGCCAGCAAGGTCATCACTCCGATGAGGAGCCCAAGAAGGGATGCTGCTTTTCTTGTTTCGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138312.p1 GENE.S_Transcript_138312~~S_Transcript_138312.p1 ORF type:5prime_partial len:250 (-),score=63.99,AvrRpt-cleavage|PF05627.7|0.006,AvrRpt-cleavage|PF05627.7|0.043,AvrRpt-cleavage|PF05627.7|3.9e-12 S_Transcript_138312:360-1109(-)
AAIKPEPQVAQSKVPQFGAWEGEGEAQYTMCFENVRKNKNGIATTEEPSKANQPNRGMSPPQNEPQAEKPRSKVPQFGAWDGGENVQYTAYFDGARKNKEETFEPQLNRDVADRSRPPSAGGGARPKPEQIGTKEGGDSRNASRGSESSQKPGRPALGGQSPHNSRGKPQPKPVSRGSQSSQPEKGTAIPQWGVWNTDPAQAEGFTGAFTRAREDKMTPQNRNTPSSYRQQGHHSDEEPKKGCCFSCFG*

Click here to download the sequence:
Link to NCBI Protein BLAST