Transcript Information: S_Transcript_138313.p1


Annotated TAIR IDAT3G25070.1
Annotated Gene NameRPM1 interacting protein 4
Annotated Gene Symbol(s)RIN4
Annotation TypeHomolog
Chromosome Positionchr3:9132458-9133747 | Forward length=211
E-Value6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.175976257648
Replicate 23.8140460671236
Replicate 35.1011823209959
Condition 2: 8 Hour
Replicate 110.37911284052
Replicate 28.5679420322357
Replicate 37.5966052634774
Condition 3: 24 Hour
Replicate 15.6936132502081
Replicate 23.8576700555485
Replicate 33.555234982636


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138313.p1 GENE.S_Transcript_138313~~S_Transcript_138313.p1 ORF type:complete len:376 (-),score=85.07,AvrRpt-cleavage|PF05627.7|0.00011,AvrRpt-cleavage|PF05627.7|1.8e-05,AvrRpt-cleavage|PF05627.7|0.01,AvrRpt-cleavage|PF05627.7|0.034,AvrRpt-cleavage|PF05627.7|6.9e-12 S_Transcript_138313:86-1213(-)
ATGGCTTCCAAAGTTCCAAAGTTTGGTGCTTGGGAGGGTGGGGAAAACTATACAGTTTGCTTCGATAATGCTCGAAAGACCAAGAACAATGGAGCCATGATAAACCCTAACGACCCTGAAGAAAACCCAGATATGTTCCAACAGGATGGAGGTTCAGTTCAAGCTCCCCCGGCACACAACAGAACCGATTCAGAGGCATCACAGCAATCCAAAGTACCCCAGTTTGGCGCCTGGGACAGTGGAGACAATGTTGGTTACACTGTTTATTTTGAAAAGGCTCGGAAAACTAAGAATGATCCGCCCACAAAGCCTGAAAACGAGCCCCAGCCAAACCAGAACACAAATCCTCGCAAGAAATCTCCAGCTCAGACTCGCCTTGCTGCAATCAAACCTGAGCCACAAGTAGCACAGTCCAAGGTACCACAGTTTGGCGCTTGGGAAGGGGAAGGGGAAGCTCAGTACACTATGTGCTTTGAAAATGTTCGGAAGAATAAGAATGGCATCGCTACCACAGAGGAGCCTTCTAAGGCAAATCAACCAAACCAGGGCACGAGTCCACCACAGAAAGAGCCTCGAGCTGAAAAGCCTCGTTCTAAGGTGCCCCAGTTTGGCGCTTGGGATGGGGGAGAGAATGTTCAATACACGGCTTACTTTGATAATGCTAGGAAGAATAGAGAGGAACCAGTCGAGCCCCAGCTGAATCGTGATGTTGCTGATAGGTCTAGGCCGCCTTCTGCTGGAGGAGGGGCTAGGCCCAAGCCTGAGCAGATAGGGACCAAGGAAGGAGGTGATTCGAGAAATGCAAGCCGTGGTTCTGAAAGCTCTCAGAAGCCAGGCCGACCAGCTCTTGGGGGTCAGTCACCGCACAATTCAAGAGGGAAGCCTCAACCAAAACCTGTTAGTCGAGGGAGTCAGAGTTCACAGCCTGAGAAAGGGACAGCCATTCCACAATGGGGTGTATGGAACACAGATCCAGCACAAGCTGAGGGTTTTACAGGTGCATTCACGAGGGCTCGGGAGGATAAAATGACACCGCAAAACAGAAACACTCCCTCTTCTTATCGCCAGCAAGGTCATCACTCCGATGAGGAGCCCAAGGTAAGTATATTACTTCATGTATATATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138313.p1 GENE.S_Transcript_138313~~S_Transcript_138313.p1 ORF type:complete len:376 (-),score=85.07,AvrRpt-cleavage|PF05627.7|0.00011,AvrRpt-cleavage|PF05627.7|1.8e-05,AvrRpt-cleavage|PF05627.7|0.01,AvrRpt-cleavage|PF05627.7|0.034,AvrRpt-cleavage|PF05627.7|6.9e-12 S_Transcript_138313:86-1213(-)
MASKVPKFGAWEGGENYTVCFDNARKTKNNGAMINPNDPEENPDMFQQDGGSVQAPPAHNRTDSEASQQSKVPQFGAWDSGDNVGYTVYFEKARKTKNDPPTKPENEPQPNQNTNPRKKSPAQTRLAAIKPEPQVAQSKVPQFGAWEGEGEAQYTMCFENVRKNKNGIATTEEPSKANQPNQGTSPPQKEPRAEKPRSKVPQFGAWDGGENVQYTAYFDNARKNREEPVEPQLNRDVADRSRPPSAGGGARPKPEQIGTKEGGDSRNASRGSESSQKPGRPALGGQSPHNSRGKPQPKPVSRGSQSSQPEKGTAIPQWGVWNTDPAQAEGFTGAFTRAREDKMTPQNRNTPSSYRQQGHHSDEEPKVSILLHVYI*

Click here to download the sequence:
Link to NCBI Protein BLAST