Transcript Information: S_Transcript_138368.p1


Annotated TAIR IDAT5G05560.1
Annotated Gene NameE3 ubiquitin ligase, putative
Annotated Gene Symbol(s)EMB2771
Annotation TypeOrtholog
Chromosome Positionchr5:1641452-1654685 | Forward length=1678
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5313571244623
Replicate 22.3923506749112
Replicate 32.128457810536
Condition 2: 8 Hour
Replicate 13.4753489610039
Replicate 24.0289188419038
Replicate 33.7711613708242
Condition 3: 24 Hour
Replicate 12.1055309388524
Replicate 21.7389481298275
Replicate 32.2231224935391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138368.p1 GENE.S_Transcript_138368~~S_Transcript_138368.p1 ORF type:3prime_partial len:1577 (+),score=304.22,ANAPC1|PF12859.3|3.4e-16 S_Transcript_138368:185-4912(+)
ATGCCGGTAGGTGTTCGAGAGCTGAAAGTGTTGGGAGAATTCAAGCCATTTGGTTTAATAGCCGAAGCACTCGACGGAAAACCCACCGAAAAAAATGTCTCAGACAAGTACGATTACTTCCTTTTCGACCCTGACGTTACTAAAGAGAAAGACAAATTTCAGGTTTCCGATTCTTCGCTATCTTCTCCCTCCGGCGATGGTTGTGATCACGAGATATTTATTCGCGGAAATCGGGTAATGTGGATTACAGGTTCACGTGTGTACAAGAGATTCACCCTAAGTTCTCCAGTAATCATGGCATGTTGGTGTCATATGGCTCACACATCTCAGGCTGTGCTTTGTGTATTACAAGTTGATTCTTTGACAATTTTCAGCACTGCAGGTGAACTAACATCTATCCCACTTTCGGGAATAGTTACCTCAATATGGCCACTTCCATTTGGGTTACTTGTGCAGCAAGCAGCTGAAGGGAACCCTCCAAGTTACATTCCTTACTCATCCACTAGCCCATTTTTAAGTGCTAGAGATATATCTCACTCAAAAAGTGAGGTCCGGCAAAGTCCCCAACAGAGCTTCAGATTTGCTATGAAAGGCAATGTAGCTTCAATCTCTTCACATCTAATTTTGACCGATCCACTTGAGGAACCCCAGCCAACTTATATTTATGAAAGAGGTGAATTGAAGATAATAAAAGATTTTGATGAGAGAACTATCTGGACAAGTGATCGCATTCCTCTCATTGCTTCCCATAACAGAGACAAGATGCAACACTCTCTTTGGGTAGCAGAATCTGTCAATCCTTGTCCTAGCGAGGTGGCAACTCCTAGTTCTCAGTTGTTTCAGTCTGAGGTTGTCCCAAGGCAATTCTCTTTTCGAAGAATCTGGCAAGAAAAAGGTTCCCAGACGGCTGCTACCAAGGTCTTTTTGGCCACAGACGATGATGCAGCACCTATTATTTGTTTCCTTCTCCAAGAACATAAAAAGTTATTAGCCATAAGGCTTCAAACTGTTAAAGTTAATGACGACATGCTCATTGATGTAAAACCAGACATGAGTTGGAGCATACAAGCAGTCGCCGCAGAACCTGTTGCTGTTACCCGTTCAAGAGTGAAGGTCGGGCTGCTGCCATTTGCAGATATTCTTGTTCTGGATCCAGATAACAATGTATATCTATATTCGGGGAAGCAGCGCCTTTGTAAATATATACTTCCTTCATGCTTAAGCAAACGGCTTCTTGAAGAAAATGTTACGATCCCAGCCATTCACAAAGTGAAAATAATAGGATTGGCTGATGCTGTTGGGACCCGTATAAATTTAATTTTAAGCAGTGGGCAGATGCTTAGATGTGCATTGCGAAGAGGCCCTTTATGTTCTCTTTCAAATGATTGCATCACAGCAATGGCTGAGGGGCTTAGCTCCCCCTTTTATAATAATTTCCTTCAGCTTTTTTGGGGAACCTGTGATCCTGGCTATGTGGAAAATGATAGCTCTAGTGTTGATTCTGAGTGGGAGTATTTTACAAGCATCATAATGCAGCTGTACAGGAAATCTTCATCAACATCACATCGAGATCCATTTCTTGTTTCATCCTCATCTTGGAACTTTCTCATTAATAGTGAATTTCATAAGAACTATCGCAACCGTAACTTGTTCACTGCGATCATAACTGAAGGTTTAGTTGACGAACGTGAAAATCGCTCGTCTTCTTCAAGCAGTGAAGATCTGCATAGCCCCAAAGGATTCCCTGATGCCAAGTTTTTGATTGAGTGCTTGGTGTCCCTGCATGCAGTTTATGAAAATCTCAAACTAATCAATCTTCGGAAGCGGGATTTGGAACTACTAGTCGTTCTTCTATGTGACATTGCTAATTTTCTTGGAGAGGAGAGTTATGTTGATCACTATATTCGTGATTTTCCTTATCTGGCCAAGAAAATACGAAAATCTCAGCCTTCATCTTCAAGAAGATTCCCACCAAGTTTATACAGATGGCTTGAAAACTGTTTGTTACATGGCCTTCATGCTGCAGCTATTGATGACTTGCCATCTTTGGTTTGTAAGGATGGAATCTCCTCTGTGAGCTGGTCTCGAAAAGTAGTTTCATTCTATAGCTTATTATCAGGTGCGGCACAAATGGATAGGAAGCTCTCTTCTGGTGTATCTTGTAATATTGTTTCAGGTTTATCATCAACAGTTGAGGAGCAAACAGTCCTTGCTATGGTTGCTGAAGGATTTGGTTTGCAGCAGCTTGATCTATTGCCTATTGGTGTTTCATTACCTCTGAGACATGCAGTAAATAAATGCCGGGAATCCCCTCCCACAGACTGGCCAGCAGCGGCATATGTCCTTCTTGGTCGGGAAGAATTGGCTTTGTCTTGCGTGACACACTTGAAAAAATCACAAGAGCTTGAAACTCAAACCAACAGACATTTAATTTCAATGTCAACGCCATACATGCAACATTTACAGCCAGTGACAATTCCGTCTACCGTTTCAGACACCATTGGATTGGATAATCTTAAGTTTGAAGACATGGATACTTCTGATGATTCTACAATAGATGGCATGGAACATTTGTTCAACTCTAGCACTCAGTTGCGGTATGGTAGAGATCTGCGTTTGAATGAGGTCAGACGTCTTTTGTCCTCTGCGAGACCTGTTGCAATTCAAACATCTGTTAGTCCTACTGCGTCAGATCAGGACCTGCAACAGGCTCAGCTGTGGCAGTTTGCCCAAAGGACAACTGCTCTACCTTTCGGCCGTGGAGCTTTTACTCTTGCTACCACCTGTACTCTTTTGACCGAGGCGCTCACAGTTCCAAAGCTTGTTTTGGCTGGACGGTTGCCTGCTCAGCAAAATGCCACTGTTAATATAGACCCAAATGTACGAAATTTGCAAGAACTTCGAGCCTGGCCTGAGTTTCACAATGCAGTGGCTGCTGGATTAAGGCTCGCTCCATTTCAGGGTAAAATGTCAAGAACTTGGATCATATATAACAAGCCTGAGGAACCAAATGCAATTCATGCAGGTCTTCTCCTTGCATTGGGGTTACATGGACACCTAACCGTTCTAACAATAAGCGACATATTCCAGTACTATCAACAGGGTCATGAAAGCACAACTGTTGGGTTAATGCTTGGTCTGGCAGCATCATACAGGGGTACAATGCAGCCAACTATGTCAAAGTCCTTCTATGTTCATTTACCTGCCTATCATCCTTCTTCCTTCCCTGAGCTTGAAGTTCCAACAGTTCTGCAGTCTGCGGCATTGATATCTCTTGGTCTCCTGTTTGAGGGTTCTGCGCATCCTCAGACAATGCAGTTTCTTCTGGCCGAAATAGGTCATAGAAGTGGTGGTGATAATGTGCTTGAGAGGGAGGGCTATGCTGTGTCGGCTGGATTTTCACTTGGACTAGTTGCTTTGGGTCGTGGTGAGGATAAATTTGCTTGCATGGACACTCTGGTTGATCGGTTGTTCCAATATGCTGGTGGAAGTTATAATGAGAAGACCCGATTGACACCAGTGATGGATGAACACAACCGGGGAGCTGGACAGATGCTGGATGGTATCCCTGTCAATGTTGATGTCACTGCACCAGGAGCTATAATTGCATTAGCTTTGATGTTCATGAAGACTGAGTCAGAAGTGATATTTTCCAGACTTTCTATTCCTCAAACAAATTTTGAGTTGCAATACTTGAGGCCGGACTTCATAATGCTTCGTGTCATTGCACGCAACTTAATAATGTGGGGCAGGATTAATCCATACAAAGAATGGGTAGAATCTCAGATTCCTCAGATTGTGAAAGATGGTGTTGAAAATCTTGGAGATGATCACATTGATATGGATGATGTGGATGAAGAAGCAGTTGTCCAGGCATATGTGAATATTGTGGCTGGAGCCTGCATTTCTCTTGGGTTGAAGTATGCCGGATCAAGAAATGGCAATGCTCAAGATTTGCTCTACAGTTATGCTATGTACTTCCTGAATGAGATTAAGCCTGTTTCTGGTTCAGTTTCCGGTGCATTTCCTAGAGGTTTATCAAAGTTTGTGGACCGCAGCACATTGGAGATATGCCTTCATCTTGTTGTTCTTTCCTTGGCTTTGGTCATGGCTGGTTCTGGGAATCTGCAAACATTTCGATTGCTGAGATTTTTACGCTGCAGAAACTCTTCTGATGGCCAAGCTAATTTCGGCATTCAGATGGCTGTAAGTTTGGCAATCGGCTTTTTGTTTCTTGGAGGAGGAATGCAATCATTTTCGACTAGTAAAGGTGCTGTTGCTGCCTTGTTAATCACTCTTTATCCTCGCTTTCCGACTGGACCAAATGATAACCGTTGCCACCTTCAGGCATATAGGCATTTCTATGTCCTTGCTACAGAAGCTCGCTGGATTCAAACAGTTGATGTTGACACAGGATTGCCTGTTTATGCCCCTCTTGAAATTACTGTTAAAGAAACTGAACATCATGCAGAAACAAGTTTTTGTGAGGTCACACCCTGCATCCTTCCAGAACGAGCTATTCTAAAGACTGTTCGTGTTTGTGGCCCAAGGTATTGGTCCCAAGTCATAGATCTTACTCCTGAAGATAAACCTTGGTGGGTTGCTGGTGACAAGAGTCATCCATTTAATTCTGGTGTTTTATACATCAAAAGAAAGGTCGGAGCATGTTCATATGTGGATGATCCTTTTGGTTGCCAGTCATTAATTTCACGAGCAATGAACAAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138368.p1 GENE.S_Transcript_138368~~S_Transcript_138368.p1 ORF type:3prime_partial len:1577 (+),score=304.22,ANAPC1|PF12859.3|3.4e-16 S_Transcript_138368:185-4912(+)
MPVGVRELKVLGEFKPFGLIAEALDGKPTEKNVSDKYDYFLFDPDVTKEKDKFQVSDSSLSSPSGDGCDHEIFIRGNRVMWITGSRVYKRFTLSSPVIMACWCHMAHTSQAVLCVLQVDSLTIFSTAGELTSIPLSGIVTSIWPLPFGLLVQQAAEGNPPSYIPYSSTSPFLSARDISHSKSEVRQSPQQSFRFAMKGNVASISSHLILTDPLEEPQPTYIYERGELKIIKDFDERTIWTSDRIPLIASHNRDKMQHSLWVAESVNPCPSEVATPSSQLFQSEVVPRQFSFRRIWQEKGSQTAATKVFLATDDDAAPIICFLLQEHKKLLAIRLQTVKVNDDMLIDVKPDMSWSIQAVAAEPVAVTRSRVKVGLLPFADILVLDPDNNVYLYSGKQRLCKYILPSCLSKRLLEENVTIPAIHKVKIIGLADAVGTRINLILSSGQMLRCALRRGPLCSLSNDCITAMAEGLSSPFYNNFLQLFWGTCDPGYVENDSSSVDSEWEYFTSIIMQLYRKSSSTSHRDPFLVSSSSWNFLINSEFHKNYRNRNLFTAIITEGLVDERENRSSSSSSEDLHSPKGFPDAKFLIECLVSLHAVYENLKLINLRKRDLELLVVLLCDIANFLGEESYVDHYIRDFPYLAKKIRKSQPSSSRRFPPSLYRWLENCLLHGLHAAAIDDLPSLVCKDGISSVSWSRKVVSFYSLLSGAAQMDRKLSSGVSCNIVSGLSSTVEEQTVLAMVAEGFGLQQLDLLPIGVSLPLRHAVNKCRESPPTDWPAAAYVLLGREELALSCVTHLKKSQELETQTNRHLISMSTPYMQHLQPVTIPSTVSDTIGLDNLKFEDMDTSDDSTIDGMEHLFNSSTQLRYGRDLRLNEVRRLLSSARPVAIQTSVSPTASDQDLQQAQLWQFAQRTTALPFGRGAFTLATTCTLLTEALTVPKLVLAGRLPAQQNATVNIDPNVRNLQELRAWPEFHNAVAAGLRLAPFQGKMSRTWIIYNKPEEPNAIHAGLLLALGLHGHLTVLTISDIFQYYQQGHESTTVGLMLGLAASYRGTMQPTMSKSFYVHLPAYHPSSFPELEVPTVLQSAALISLGLLFEGSAHPQTMQFLLAEIGHRSGGDNVLEREGYAVSAGFSLGLVALGRGEDKFACMDTLVDRLFQYAGGSYNEKTRLTPVMDEHNRGAGQMLDGIPVNVDVTAPGAIIALALMFMKTESEVIFSRLSIPQTNFELQYLRPDFIMLRVIARNLIMWGRINPYKEWVESQIPQIVKDGVENLGDDHIDMDDVDEEAVVQAYVNIVAGACISLGLKYAGSRNGNAQDLLYSYAMYFLNEIKPVSGSVSGAFPRGLSKFVDRSTLEICLHLVVLSLALVMAGSGNLQTFRLLRFLRCRNSSDGQANFGIQMAVSLAIGFLFLGGGMQSFSTSKGAVAALLITLYPRFPTGPNDNRCHLQAYRHFYVLATEARWIQTVDVDTGLPVYAPLEITVKETEHHAETSFCEVTPCILPERAILKTVRVCGPRYWSQVIDLTPEDKPWWVAGDKSHPFNSGVLYIKRKVGACSYVDDPFGCQSLISRAMNKA

Click here to download the sequence:
Link to NCBI Protein BLAST