Transcript Information: S_Transcript_13837.p3


Annotated TAIR IDAT4G32910.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15881364-15885210 | Forward length=716
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5775751091696
Replicate 26.3414005913815
Replicate 37.06787490629
Condition 2: 8 Hour
Replicate 16.512544348346
Replicate 28.3057162614554
Replicate 310.849383511517
Condition 3: 24 Hour
Replicate 16.1479612219038
Replicate 24.4784777366435
Replicate 36.192238446765


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13837.p3 GENE.S_Transcript_13837~~S_Transcript_13837.p3 ORF type:5prime_partial len:167 (+),score=11.31 S_Transcript_13837:2-502(+)
ACCCCCCAAATTTCCAAAACCCCCCAAATTTCCAAAACCCCCCAAATTTCCAAAACCCTCTCATCCTCTGCGGCGAAGATGCCGGCACCGACGTCAGATTCCGACACTCGATTCTCTCTCCTCCCAAAACCATCCTCCACCACCGACGACCCTCCGCTGCCAGTGACATACCCTCTCCGCCACTCTCTCTCCTCCCCAATCCATCGAATCGCCATCAACTGGTCTCGTGGCAACACTCTCCGTGTCTTTCTCTTCTCAAATCCTAACTCTAAACCCTCCGAATCCGACGATTCCGGCGGAAACGTCGTCGAGTTCAAGCTCGGTGGCGCCGGTAATGGCGGAATCAAAGATGATGATGCTCAGTGGAGGAGGATTGTGTACGGTTCTGTTAAACCTTATGCTGTGTTCAGAACAAGAAGAACTCGGCTTTGGCTATGTCTAAGCTTCCTGTTGGAGCACTTTCCAATGTCGACTGGTAATTTATTGATTTTCGTTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13837.p3 GENE.S_Transcript_13837~~S_Transcript_13837.p3 ORF type:5prime_partial len:167 (+),score=11.31 S_Transcript_13837:2-502(+)
TPQISKTPQISKTPQISKTLSSSAAKMPAPTSDSDTRFSLLPKPSSTTDDPPLPVTYPLRHSLSSPIHRIAINWSRGNTLRVFLFSNPNSKPSESDDSGGNVVEFKLGGAGNGGIKDDDAQWRRIVYGSVKPYAVFRTRRTRLWLCLSFLLEHFPMSTGNLLIFVC*

Click here to download the sequence:
Link to NCBI Protein BLAST