Transcript Information: S_Transcript_138603.p1


Annotated TAIR IDAT1G04020.1
Annotated Gene Namebreast cancer associated RING 1
Annotated Gene Symbol(s)ATBARD1, BARD1, ROW1
Annotation TypeOrtholog
Chromosome Positionchr1:1036610-1040045 | Forward length=714
E-Value1.2E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4729022888462
Replicate 23.5050105396336
Replicate 33.1915089392897
Condition 2: 8 Hour
Replicate 13.8415951351431
Replicate 25.0138327447898
Replicate 35.4423440693569
Condition 3: 24 Hour
Replicate 11.1774547129682
Replicate 21.9288350277742
Replicate 32.4327645667346


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138603.p1 GENE.S_Transcript_138603~~S_Transcript_138603.p1 ORF type:complete len:705 (+),score=142.46,BRCT|PF00533.22|6.7e+03,BRCT|PF00533.22|5e-10,BRCT|PF00533.22|0.11,zf-HC5HC2H|PF13771.2|3.6e+03,zf-HC5HC2H|PF13771.2|1.3e+04,zf-HC5HC2H|PF13771.2|2.3e-10,zf-HC5HC2H_2|PF13832.2|3.9e+03,zf-HC5HC2H_2|PF13832.2|3.8e-07,BRCT_2|PF16589.1|11,BRCT_2|PF16589.1|0.00047,zf-RING_6|PF14835.2|1.9e-06,zf-RING_6|PF14835.2|1.1e+04,zf-RING_6|PF14835.2|8e+02 S_Transcript_138603:93-2207(+)
ATGGCGGATACTCGTACCCATTTCCTTAATCCCTGGGTTCTTCATCTTCAAAAACTTGGCCTTGAACTCAAATGCTCCTTTTGCTTGAAGTTTTACAACAAACCAATGTTACTACCCTGCAACCACATTCTCTGTTGTTCTTGTGTGCCCAAATCTAATTCATTTGGATCAGAATGTCCTCTCTGCAAGCTTCGGTACTTTGAACAAGAAGTGAGGCCAGCTCCTTATATTGAAAATGTTGTCAACATCTATCGAAGTTTGGATGCTTCGTTTGCTCGACACATGTTTGAATCAGATATCGGAGGAGTTTCAGAAGGAGTGCTTAATTCCTCTTCACCTGGGAACTTGAGTAGTGGGCCATTGGGTACTAAGCGAGTTCAGGGGTCGAACAATTCTTCCGTAGTGACCAGGATGGTGGAGAAAGGCACAGCTAACTCTGGCTTCAGGAATGGGGGTGTGGTGCAGGATTATCAGACATTTGAAAGCAATATGAGTTCTATGGAACATCATCAAGCAAGAGCTGCACAACAAGAACATGGAGCTTTGGTAGACGTGGACATGAAGCAGATTGAATTGTCCCCAGATAGCCCTCCTTCCTCTGGTGTCAGCAAGGGTGTTGAAACTGATGGTCGTGATCCAGCTTGCAGTGATGATACTACTCAGACCTGCTCATCAAAGAAATCTGCCAAGAGGAATGTTGATGATTTTGGAGCACATAGGGTTGTTGAATGCTATGATTCTTCTGTCAAGAAGCAAAAGCTGCTAAATCATGGTCTGCCCTCAACACATGAGGGTCATTCACCCCTGTCGACACCTATGAATTTGCAGAACTCTGCATCTACTAGCTCTGACATAAACGGAAAATGTGCGAGTTACTCTGGTGACCCAGTTGCAGTCGAAGCAGATTCTACAAGTTTAGTCAACTTCCTTTGTGCATTCTGCCAGACTTGGAAAATAACGGAGGGTAGTGGACCAATGCAACATTTTGCTGACGGGAAACAAGTTTTTGGAAGTGAAGCCGGTCGTTCTAATGTCATACATGTCCACAAAAGCTGCATTGAATGGGCTCCCCAAATCTTCTATGAGAGCGACACGGTTATAAAGAATTTGGATAAAGAGTTGGCCAGGGCTGGAAAGCTCAAGTGCACAGGATGTGGGCTTAAGGGAGCTGCACTTGGCTGTTTTGCAAAATCCTGCCGCAGAAGTTACCATGTTCCTTGTGCTTTTGGAATTGAAGACTGCAGATGGGATTCAGATGACTTCTTGATGCTCTGCCCTTTTCATACTTCACATAAGTTTCCAAGTGAGAAGTTCCGAAAGAAGCTTGCTCCAAAGAAATGTACAACTACAATATCAGCTCAAACGACAACGTCAGCTCCAATCTATGATGATCAGAAAAGTGCACAGCAGTCGGATTTTTGGGCATCATCACCTACTGGAGCTAAAAATTGGGTTCTATGTGGATCTGCTCTGTCTGCTGAGGAAAAGTTTTTGTTGGTCAAATTTGCAAACTTGTGCGGTGCAACTGTGACCAAATCTTGGAATCCAAATGTCACTCATGTAATTGCAGCAACAGATGCAAATGGTGCATGCAGTAGGACCTTGAAAGTTCTCATGGCAATTCTTAAGGGACGATGGATACTTAGAACTGACTGGATCAGCGCATGCATGCGATCCAAATCTCCTGTGCATGAAGATCCTTATGAAATCAGCCTTGATAATCATGGCTGTACTGATGGCCCCAAAACTGGCAGACTAAGGGCTCTGAATAATGCACCACAGCTATTTAGCAGCTTGAAATTCTATTTCACTGGTGACTTTGTGCCCACATACAAAAAGGACATCCAAGGTTTAATTATAGCTGCTGGAGGCACCATCCTTGAGAACAAAGAACAGCTACAATCATCTTGCGGTGCCCAATCTAATCTATCAACAACCTTAGTTATTTACAATAATGATGTCCTGATGGGTACCGAAGATGCTTGTGAGATGTCAAGACGACAAGCAGAAGCAGAAAGTGTGGCAATTGAAAGTGGGTCGCAAGTGATTGCTCACACTTGGATTTTGGATTCAATCGCTTCAGGCTCATTGCAGTCCTTCGCTCCTCCAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138603.p1 GENE.S_Transcript_138603~~S_Transcript_138603.p1 ORF type:complete len:705 (+),score=142.46,BRCT|PF00533.22|6.7e+03,BRCT|PF00533.22|5e-10,BRCT|PF00533.22|0.11,zf-HC5HC2H|PF13771.2|3.6e+03,zf-HC5HC2H|PF13771.2|1.3e+04,zf-HC5HC2H|PF13771.2|2.3e-10,zf-HC5HC2H_2|PF13832.2|3.9e+03,zf-HC5HC2H_2|PF13832.2|3.8e-07,BRCT_2|PF16589.1|11,BRCT_2|PF16589.1|0.00047,zf-RING_6|PF14835.2|1.9e-06,zf-RING_6|PF14835.2|1.1e+04,zf-RING_6|PF14835.2|8e+02 S_Transcript_138603:93-2207(+)
MADTRTHFLNPWVLHLQKLGLELKCSFCLKFYNKPMLLPCNHILCCSCVPKSNSFGSECPLCKLRYFEQEVRPAPYIENVVNIYRSLDASFARHMFESDIGGVSEGVLNSSSPGNLSSGPLGTKRVQGSNNSSVVTRMVEKGTANSGFRNGGVVQDYQTFESNMSSMEHHQARAAQQEHGALVDVDMKQIELSPDSPPSSGVSKGVETDGRDPACSDDTTQTCSSKKSAKRNVDDFGAHRVVECYDSSVKKQKLLNHGLPSTHEGHSPLSTPMNLQNSASTSSDINGKCASYSGDPVAVEADSTSLVNFLCAFCQTWKITEGSGPMQHFADGKQVFGSEAGRSNVIHVHKSCIEWAPQIFYESDTVIKNLDKELARAGKLKCTGCGLKGAALGCFAKSCRRSYHVPCAFGIEDCRWDSDDFLMLCPFHTSHKFPSEKFRKKLAPKKCTTTISAQTTTSAPIYDDQKSAQQSDFWASSPTGAKNWVLCGSALSAEEKFLLVKFANLCGATVTKSWNPNVTHVIAATDANGACSRTLKVLMAILKGRWILRTDWISACMRSKSPVHEDPYEISLDNHGCTDGPKTGRLRALNNAPQLFSSLKFYFTGDFVPTYKKDIQGLIIAAGGTILENKEQLQSSCGAQSNLSTTLVIYNNDVLMGTEDACEMSRRQAEAESVAIESGSQVIAHTWILDSIASGSLQSFAPPR*

Click here to download the sequence:
Link to NCBI Protein BLAST