Transcript Information: S_Transcript_138682.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value4E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1127387276034
Replicate 21.9218457802713
Replicate 31.6707705162844
Condition 2: 8 Hour
Replicate 11.9319168928413
Replicate 21.5590138424897
Replicate 32.7480361023843
Condition 3: 24 Hour
Replicate 11.370062379201
Replicate 21.0265837996255
Replicate 31.2303436295179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138682.p1 GENE.S_Transcript_138682~~S_Transcript_138682.p1 ORF type:complete len:287 (+),score=49.92,PPR_2|PF13041.2|2.7e-18,PPR_2|PF13041.2|7.2e-18,PPR_2|PF13041.2|2.6e-12,PPR_2|PF13041.2|1e-14,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|0.00017,PPR_1|PF12854.3|7e-14,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|1.4e-14,PPR_1|PF12854.3|3.8e-09,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.0021,PPR|PF01535.16|5.7e-09,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|2.6e-09,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|0.15,PPR|PF01535.16|0.00086,PPR|PF01535.16|0.00052,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|18,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.8 S_Transcript_138682:1150-2010(+)
ATGGGTCAAGACCCCGATACTGTCACTTACACCACCCTTATTAATGGATATTGCAAGCAAGGTCTAATAGACAAAGCACTGCAAGTTTTTGATGTTTTGGCTGCCAAGGGTTGTGCACCTGATGTTGTAACCTACACTTCATTGATCAGTGGCCTTTTTGTTCAAAAAAGGACGGATGATGCAATGTGGCTCTTTAGGGAGATGTCACTCAAAGGATTGACTCCAAATGCGTTCACATACAGCACAGTCATAGATGGATTGTGCAAGGTTGGTAGAATTGAAGAAGCATGCAGTATTTTCGACGAGATGCAAATCAGGGGTGGAGTTGCTAACCTCATTACTTATGGTGCTCTACTAAGTGGCCTGTGCAAAAGCCATCATCTTGACAAGGCCTTCAAACTTTTTCACACTATGGAACATGAAGGATTAATTCCGAACATAAAGATCTACGTGATCCTCATAGATGGATTTTGTGAGGCCAGCCAAGTTGACATTGTTAGGAAGCTACTCTCTCTTCTTTTAGAGAAAAACATATGGGGTGATGCTCAGTGGTACAATGTCATCATCAATCGACTTTGCAAAGTAGGGATGCTGGCTGAAGCAAGTGACTTCATAAGGAAAATTGAGAGCAGTGGCTGCTTTCCTAATCATTCCACTTACAATAGTCTGATCCAGGCATATCTTGGCAAACATGAGATATCTAAAGCTTTGGAATATATTCAGATGATGCATGATAATGGTTACTATATGTGTAAGCAGGTCATCAACTTAATTGCTGATATTTTGTCAAACAAAACAGTGGATCTGCAACAGGAACAGATGCTGAAGAAGTTCGTCCTTATCAGTGAAAATTTGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138682.p1 GENE.S_Transcript_138682~~S_Transcript_138682.p1 ORF type:complete len:287 (+),score=49.92,PPR_2|PF13041.2|2.7e-18,PPR_2|PF13041.2|7.2e-18,PPR_2|PF13041.2|2.6e-12,PPR_2|PF13041.2|1e-14,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|0.00017,PPR_1|PF12854.3|7e-14,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|1.4e-14,PPR_1|PF12854.3|3.8e-09,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.0021,PPR|PF01535.16|5.7e-09,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|2.6e-09,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|0.15,PPR|PF01535.16|0.00086,PPR|PF01535.16|0.00052,PPR_3|PF13812.2|2.2e-05,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|18,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.8 S_Transcript_138682:1150-2010(+)
MGQDPDTVTYTTLINGYCKQGLIDKALQVFDVLAAKGCAPDVVTYTSLISGLFVQKRTDDAMWLFREMSLKGLTPNAFTYSTVIDGLCKVGRIEEACSIFDEMQIRGGVANLITYGALLSGLCKSHHLDKAFKLFHTMEHEGLIPNIKIYVILIDGFCEASQVDIVRKLLSLLLEKNIWGDAQWYNVIINRLCKVGMLAEASDFIRKIESSGCFPNHSTYNSLIQAYLGKHEISKALEYIQMMHDNGYYMCKQVINLIADILSNKTVDLQQEQMLKKFVLISENLH*

Click here to download the sequence:
Link to NCBI Protein BLAST