Transcript Information: S_Transcript_138684.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value1E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.39049185057548
Replicate 30
Condition 2: 8 Hour
Replicate 10.37744053658643
Replicate 20.79192384565404
Replicate 30.44015024553059
Condition 3: 24 Hour
Replicate 10.25775673735214
Replicate 20.33427450702577
Replicate 30.44640786557728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138684.p1 GENE.S_Transcript_138684~~S_Transcript_138684.p1 ORF type:complete len:339 (+),score=65.29,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|1.8e-18,PPR_2|PF13041.2|9.3e-18,PPR_2|PF13041.2|2.2e-12,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|3.4e-12,PPR_2|PF13041.2|0.00044,PPR_1|PF12854.3|2e-10,PPR_1|PF12854.3|2.4e-12,PPR_1|PF12854.3|7.5e-11,PPR_1|PF12854.3|1.7e-14,PPR_1|PF12854.3|4.8e-09,PPR_1|PF12854.3|0.0045,PPR_1|PF12854.3|5.8e-05,PPR_1|PF12854.3|0.0025,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|0.18,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|2.9e-05,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|15,MRP-S27|PF10037.5|31,MRP-S27|PF10037.5|0.16,MRP-S27|PF10037.5|1.6,MRP-S27|PF10037.5|5.2 S_Transcript_138684:689-1705(+)
ATGCTGGGCAATGGTATAATGCCAACTGGCTACTTCAAGAAATGTGTTGATGCCAATGTTTCACCAGATAACTGTACTTTCAACACATTAGTTGCTATGTTCTGCAAAGAAGGGAGGCTCAGAGAAGCCGAGCATGTTGTTGATTTGATGAATACATGGGGTCAAGACCCCAATACTGTCACTTATAATGCCCTTATTGGTGGATATTGCAAGCAAGGTCTAATAGACAAAGCACTGCAAGTTTTTGATGTTTTGGCTGCCAAGGGTTGTGCACCTGATGTTGTAACCTACACTTCATTGATCAGTGGCCTTTTTGTTCAAAAAAGGACGGATGATGCAATGTGGCTCTTTAGGGAGATGTCACTCAAAGGATTGACTCCAAATGCGTTCACATACAGCACAGTCATAGATGGATTGTGCAAGGTTGGTAGAATTGAAGAAGCATGCAGTATTTTCGACGAGATGCAAATCAGGGGTGGAGTTGCTAACCTCATTACTTATGGTGCTCTACTAAGTGGCCTGTGCAAAAGCCATCATCTTGACAAGGCCTTCAAACTTTTTCACACTATGGAACATGAAGGATTAATTCCGAACATAAAGATCTACGTGATCCTCATAGATGGATTTTGTGAGGCCAGCCAAGTTGACATTGTTAGGAAGCTACTCTCTCTTCTTTTAGAGAAAAACATATGGGGTGATGCTCAGTGGTACAATGTCATCATCAATCGACTTTGCAAAGTAGGGATGCTGGCTGAAGCAAGTGACTTCATAAGGAAAATGGAGAGGTTTGGCTGCTTTCCTAATCATTCCAGTTACAATAGTATGATCAAGGGATATCTTTGCCAAAATGAGATATCTAAGGCTTTGGAATATATTCAGATGATGCATGATAATGGTTACTATATGTGTAAGCAGGTCATCAACTTAATTGCTGATATTTTGTCAAACAAAACAGTGGATCTGCAACAGGAACAGATGCTGAAGAAGTTCGTCCTTATCAATGAAAATTTGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138684.p1 GENE.S_Transcript_138684~~S_Transcript_138684.p1 ORF type:complete len:339 (+),score=65.29,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|1.8e-18,PPR_2|PF13041.2|9.3e-18,PPR_2|PF13041.2|2.2e-12,PPR_2|PF13041.2|1.3e-14,PPR_2|PF13041.2|3.4e-12,PPR_2|PF13041.2|0.00044,PPR_1|PF12854.3|2e-10,PPR_1|PF12854.3|2.4e-12,PPR_1|PF12854.3|7.5e-11,PPR_1|PF12854.3|1.7e-14,PPR_1|PF12854.3|4.8e-09,PPR_1|PF12854.3|0.0045,PPR_1|PF12854.3|5.8e-05,PPR_1|PF12854.3|0.0025,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|3.3e-09,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|0.18,PPR|PF01535.16|3.5e-05,PPR|PF01535.16|2.9e-05,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|3.9e-05,PPR_3|PF13812.2|0.00018,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.76,PPR_3|PF13812.2|15,MRP-S27|PF10037.5|31,MRP-S27|PF10037.5|0.16,MRP-S27|PF10037.5|1.6,MRP-S27|PF10037.5|5.2 S_Transcript_138684:689-1705(+)
MLGNGIMPTGYFKKCVDANVSPDNCTFNTLVAMFCKEGRLREAEHVVDLMNTWGQDPNTVTYNALIGGYCKQGLIDKALQVFDVLAAKGCAPDVVTYTSLISGLFVQKRTDDAMWLFREMSLKGLTPNAFTYSTVIDGLCKVGRIEEACSIFDEMQIRGGVANLITYGALLSGLCKSHHLDKAFKLFHTMEHEGLIPNIKIYVILIDGFCEASQVDIVRKLLSLLLEKNIWGDAQWYNVIINRLCKVGMLAEASDFIRKMERFGCFPNHSSYNSMIKGYLCQNEISKALEYIQMMHDNGYYMCKQVINLIADILSNKTVDLQQEQMLKKFVLINENLH*

Click here to download the sequence:
Link to NCBI Protein BLAST