Transcript Information: S_Transcript_138687.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92640194173097
Replicate 20.48873268007153
Replicate 30.11672617774431
Condition 2: 8 Hour
Replicate 10.7423395363559
Replicate 20.84956387239468
Replicate 30.80946256727777
Condition 3: 24 Hour
Replicate 10.55303502507833
Replicate 20.3586046135498
Replicate 30.079816596218722


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138687.p1 GENE.S_Transcript_138687~~S_Transcript_138687.p1 ORF type:3prime_partial len:316 (+),score=49.58,PPR_2|PF13041.2|1.2e-13,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|1.6e-18,PPR_2|PF13041.2|8.4e-18,PPR_2|PF13041.2|3.9e-13,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|0.061,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|1.4e-09,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|6.8e-11,PPR_1|PF12854.3|1.6e-14,PPR_1|PF12854.3|4.3e-09,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|0.0022,PPR|PF01535.16|0.00016,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.00011,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|3e-09,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|0.17,PPR|PF01535.16|0.12,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|0.0002,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3.5e-05,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|20,PPR_3|PF13812.2|5.8e+02 S_Transcript_138687:740-1684(+)
ATGGAGTGTCATGGTTGTATGCCCGATGCTGTCACATTTAGTTCTATCATTGACAGTCTTATCAAGCGTAAGCTATTATCCGAGGCTATAAATCTTTTCTCGTTGATGATCAGCAAACGCATTACTCCTAATGTTGTCACTTACAATTGCTTCTTATGGGGACTTTGTAACGCTGGGCAATGGGATAGTGCCAACAGGCTACTTCAAGAAATGTTTGATGCCAATATTGCACCAGATAACCGCACTTTCAACACATTAGTTGCTATGTTCTGCAAAGAAGGGAGGCTCAGAGAAGCCGAGCATGTTGTTGATTTGATGAATACATGGGGTCAAGACCCCAATACTGTCACTTATAATGCCCTTATTGGTGGATATTGCAAGCAAGGTCTAATAGACAAAGCACTGCAAGTTTTTGATGTTTTGGCTGCCAAGGGTTGTGCACCTGATGTTGTAACCTACACTTCATTGATCAGTGGCCTTTTTGTTCAAAAAAGGACGGATGATGCAATGTGGCTCTTTAGGGAGATGTCACTCAAAGGATTGACTCCAAATGCGTTCACATACAGCACAGTCATAGATGGATTGTGCAAGGTTGGTAGAATTGAAGAAGCATGCAGTATTTTCGACGAGATGCAAATCAGGGGTGGAGTTGCTAACCTCATTACTTATGGTGCTCTACTAAGTGGCCTGTGCAAAAGCCATCATCTTGACAAGGCCTTCAAACTTTTTCACACTATGGAACATGAAGGATTAATTCCGAACATAAAGATCTACGTGATCCTCATAGATGGATTTTGTGAGGCCAGCCAAGTTGACATTGTTAGGAAGCTACTCTCTCTTCTTTTAGAGAAAAACATATGGGGTGATGCTCAGTGGTACAATGTCATCATCAATCGACTTTGCAAAGTAGGGATGCTGGCTGAAGCAAGTGACTTCATAAGGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138687.p1 GENE.S_Transcript_138687~~S_Transcript_138687.p1 ORF type:3prime_partial len:316 (+),score=49.58,PPR_2|PF13041.2|1.2e-13,PPR_2|PF13041.2|1.8e-14,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|1.6e-18,PPR_2|PF13041.2|8.4e-18,PPR_2|PF13041.2|3.9e-13,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|0.061,PPR_1|PF12854.3|1.5e-06,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|1.4e-09,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|6.8e-11,PPR_1|PF12854.3|1.6e-14,PPR_1|PF12854.3|4.3e-09,PPR_1|PF12854.3|0.0041,PPR_1|PF12854.3|0.0022,PPR|PF01535.16|0.00016,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.00011,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|3e-09,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|0.17,PPR|PF01535.16|0.12,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|0.074,PPR_3|PF13812.2|0.0002,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3.5e-05,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|20,PPR_3|PF13812.2|5.8e+02 S_Transcript_138687:740-1684(+)
MECHGCMPDAVTFSSIIDSLIKRKLLSEAINLFSLMISKRITPNVVTYNCFLWGLCNAGQWDSANRLLQEMFDANIAPDNRTFNTLVAMFCKEGRLREAEHVVDLMNTWGQDPNTVTYNALIGGYCKQGLIDKALQVFDVLAAKGCAPDVVTYTSLISGLFVQKRTDDAMWLFREMSLKGLTPNAFTYSTVIDGLCKVGRIEEACSIFDEMQIRGGVANLITYGALLSGLCKSHHLDKAFKLFHTMEHEGLIPNIKIYVILIDGFCEASQVDIVRKLLSLLLEKNIWGDAQWYNVIINRLCKVGMLAEASDFIRK

Click here to download the sequence:
Link to NCBI Protein BLAST