Transcript Information: S_Transcript_138856.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5443752573293
Replicate 25.1135111214032
Replicate 34.2744883110428
Condition 2: 8 Hour
Replicate 15.9422311560761
Replicate 24.8355818674409
Replicate 35.8285520794871
Condition 3: 24 Hour
Replicate 15.9163226120359
Replicate 24.8986884396793
Replicate 35.7800518428391


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138856.p1 GENE.S_Transcript_138856~~S_Transcript_138856.p1 ORF type:complete len:384 (+),score=49.47,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|5.9e-17 S_Transcript_138856:2935-4086(+)
ATGGACAAGTATCTCTCATGGTCGGGGAAGGAGATCCTTATTAAGGCAGTGGCCCAATCAATCCCTACTTATGCCATGAGTGTCTTTAAATTGCCTGGCGATTTTTGTGAAGACATCCAAAGGCTTGTCCGAAAGTTTTGGAGGGGACACAAAGATGGTAAGCGGAACATACACTGGAAGAAGTGGACGTCTCTTTGTCATTCCAAGGGTGATGGGGGCTTGGGTTTTCGAGATATAAGTGCTTTCAATGATGCTCTTCTTGCTAAGCAGCTGTGGCGGTTAATGTGCAATGAATCTTCCCTGTGTGCTCGTGTACTCAAAGCAAAGTATTTTCCAAATACTAGTTTTTGGGAGGTGAATCTAGGAGCAAGGCCGAGCTATATCTGGCGAAGTCTGTGGGGTGCTCGGGAGGTGCTTAGTAGGGGTGTTAGGTGGTTGGTGGGGAATGGGGAATCAATAAAAGTATGGCATGATGCTTGGCTTCCAAGACCAATTTCTTTTAAATTAATCACACCTCTTAATGCACATAATAATCATTTACGAGTTTGTGATTTAATTGATAGAGAGAGAGGTTGTTGGAAGAAGGACATTATTGAGGGGATATTCTTGCCTGTGGATGTGGAGCAAATCCTCAAGATTCCTCTTTGTAACCACTGGCCAAATGATAAGATTGTTTGGCATTATACCCCCAATGGAAACTTCACAGTTCGGTCAGCCTACTATATGATAATGGAGCATCGACGGCGCGAGCTAGGATCTTCAAGCAATGGTGCGGACAAGTGTTTCTGGAAGAAGTTGTGGTGGCTTGATATACCTCCACGTATTCGCATGTTTGCATGGAGAGATGTGGTCAATGCACTACCTACTAGGCAAGGGTTGGAGCGACGCGTCAAAACTGGGGACATGCAATGTGTCCTATGTGGGGCTTTTGAGGAAACTACCCTGCATGCTCTAGCGGAGTGCCCAGCAGCACGTGAGCAATGGCGAAAGAGCGGATGGGCGAAGCATTACTGGGAGGGACGTACTCGGTCTGTTTTTGAATGGTGGAGTACCCTTATGGAAGATCCAAGAGTAAATGACATGGGAAGTTTCATTACAATGGCTTGGGCAATATGGAACGAACGTTGCAAAATCATGTTTGAACCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138856.p1 GENE.S_Transcript_138856~~S_Transcript_138856.p1 ORF type:complete len:384 (+),score=49.47,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|5.9e-17 S_Transcript_138856:2935-4086(+)
MDKYLSWSGKEILIKAVAQSIPTYAMSVFKLPGDFCEDIQRLVRKFWRGHKDGKRNIHWKKWTSLCHSKGDGGLGFRDISAFNDALLAKQLWRLMCNESSLCARVLKAKYFPNTSFWEVNLGARPSYIWRSLWGAREVLSRGVRWLVGNGESIKVWHDAWLPRPISFKLITPLNAHNNHLRVCDLIDRERGCWKKDIIEGIFLPVDVEQILKIPLCNHWPNDKIVWHYTPNGNFTVRSAYYMIMEHRRRELGSSSNGADKCFWKKLWWLDIPPRIRMFAWRDVVNALPTRQGLERRVKTGDMQCVLCGAFEETTLHALAECPAAREQWRKSGWAKHYWEGRTRSVFEWWSTLMEDPRVNDMGSFITMAWAIWNERCKIMFEPE*

Click here to download the sequence:
Link to NCBI Protein BLAST