Transcript Information: S_Transcript_138857.p3


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2942242444121
Replicate 23.0431433872434
Replicate 32.5438256667035
Condition 2: 8 Hour
Replicate 13.6767914339885
Replicate 23.3429199116833
Replicate 32.4500974258599
Condition 3: 24 Hour
Replicate 12.0087249186753
Replicate 21.563021488024
Replicate 32.6091770074258


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138857.p3 GENE.S_Transcript_138857~~S_Transcript_138857.p3 ORF type:complete len:174 (+),score=9.10,RVT_1|PF00078.23|4.4e-18 S_Transcript_138857:2491-3012(+)
ATGAATGACCAACTCTGCAAGCCTTACTCGGAAGAGGAAATTTACGAAGCTTTACAACAGATGCATCCTAGCAAGTCTCCTGGACCGGACGGTATGAATGCCTTCTTTTTTCAAAAATACTGGTCTATTATTAAAGAGTCGGTGCTCCATGTTGTTTTACAAATTTTGAATGGTGATGATTTTCCTCTTGAGCTTAATCATACTCATGTGTGTCTCATTCCCAAAAAACACAACCCACGTGACCTTAGTGACTTTCGCCCGATAAGCCTTTGCAATGTTATTTTTAAAATAGCTACAAAGACTATTGCTAATAGGCTGAAAATAATCCTTCCTGATATTATTTCGGAAAACCAATCCGCTTTTACTCCTGGAAGACTAATTAGTGATAATATTATTATCGCTTTTGAGGTATTCCATTCAATGCATTACAATAATAGTGCCTCGGGAAACATGGCTCTTAAACTTGATATGCGAAAGGCCTATGATAGAGTCGAGTGGAATTTTCTTGAAATATCATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138857.p3 GENE.S_Transcript_138857~~S_Transcript_138857.p3 ORF type:complete len:174 (+),score=9.10,RVT_1|PF00078.23|4.4e-18 S_Transcript_138857:2491-3012(+)
MNDQLCKPYSEEEIYEALQQMHPSKSPGPDGMNAFFFQKYWSIIKESVLHVVLQILNGDDFPLELNHTHVCLIPKKHNPRDLSDFRPISLCNVIFKIATKTIANRLKIILPDIISENQSAFTPGRLISDNIIIAFEVFHSMHYNNSASGNMALKLDMRKAYDRVEWNFLEISC*

Click here to download the sequence:
Link to NCBI Protein BLAST