Transcript Information: S_Transcript_138857.p4


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69576473817465
Replicate 21.7304148672561
Replicate 31.9286521394615
Condition 2: 8 Hour
Replicate 11.6725796327163
Replicate 21.0235486305757
Replicate 32.0897889808805
Condition 3: 24 Hour
Replicate 12.9983173418463
Replicate 21.1850358994169
Replicate 30.98909978059279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138857.p4 GENE.S_Transcript_138857~~S_Transcript_138857.p4 ORF type:complete len:153 (+),score=18.28,RVT_1|PF00078.23|3.3e-16 S_Transcript_138857:3006-3464(+)
ATGCTAAAAATGGGGTTTGATACTGGTTGGGTTGCTAATGTTATGAATTGCGTGAGAACAGTCTCATACTCTTTTCTTATCAATGGGGAGCCAAGTGAAATGGACATCCCATCTCGTGGTCTACGCCAAGGGGACCCCATATCCCCATATTTATTCTTATTGTGTGCTGAAGGCCTGTCTAGTTTGATTTCTGATGCAGTATCTACAGGCGGGCTCAATGGCCATCGTGTTGCAACAGGGGCACTAGTTATCTCTCATCTCTTATTCGCGGATGACTCAATGTTCTTTACTAGAGCTGAGGAAGATCAAGCGAGGAAGGTCTTGGACATTCTCCAATGGTATGAAGAAGCTTCGGGTCAACAAATTAATAAAGCCAAAACAACTGTCTCATTTAGCAAAGGTGTGACGAATGCGAAGCGGAATACTATTGTGCAACTCCTGGGTGTTCATGAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138857.p4 GENE.S_Transcript_138857~~S_Transcript_138857.p4 ORF type:complete len:153 (+),score=18.28,RVT_1|PF00078.23|3.3e-16 S_Transcript_138857:3006-3464(+)
MLKMGFDTGWVANVMNCVRTVSYSFLINGEPSEMDIPSRGLRQGDPISPYLFLLCAEGLSSLISDAVSTGGLNGHRVATGALVISHLLFADDSMFFTRAEEDQARKVLDILQWYEEASGQQINKAKTTVSFSKGVTNAKRNTIVQLLGVHEV*

Click here to download the sequence:
Link to NCBI Protein BLAST