Transcript Information: S_Transcript_138916.p3


Annotated TAIR IDAT1G47350.1
Annotated Gene NameF-box associated ubiquitination effector family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17358447-17360722 | Reverse length=528
E-Value8E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4109339098073
Replicate 21.9987196114822
Replicate 31.349468493922
Condition 2: 8 Hour
Replicate 11.4860899175702
Replicate 21.4031124582407
Replicate 32.1538661343012
Condition 3: 24 Hour
Replicate 12.0550935688015
Replicate 20.94761581503892
Replicate 31.5818703808087


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138916.p3 GENE.S_Transcript_138916~~S_Transcript_138916.p3 ORF type:complete len:287 (+),score=53.65,Retrotrans_gag|PF03732.13|2.4e-14 S_Transcript_138916:3202-4062(+)
ATGGTGAATACTCGGAATACACTTGTTGATGAGGCCACTAGAGCTTTCATTACAGAAGCTATAAACTCTGCAATGGCTACTGCACTGGCTACTGCATTGGATCAAAGTCCCAGGATCGTGGAACTCTCTGGCCAGGTCACGGGTCTAAGCCTGCAACATCATGAACTGGCTAATCAGGTTAATCAACTTAGAGGCAACCCAGGTAATCCTAATTCCATTTCTGTTAATGGCTATGGTAGATTATCTAGAGTTGATTTTCCAAATTTCAATGGTGAAAATGTCAAGAATTGGTTGTACAAATGCAAATTGTTTTTTGAAGTAGACAACATATTGGAAGTAAATAAGGTGAAAATAGCATCGATACATCTAGAAGATAGGGCTTTGTCGTGGCATCAAAACTTCATGAAGGGAAGAGGTAATAATTGGCCTAATTGGGATGAATATGCTGAGGCTATTTCTGTCAGATTTGGTAATGCCTATGAGGACCCAATGGCTGAATTAAAGAATTTGAAACAAGAAGATACTGTGCAGAAGTATCAAGATGCTTTTGAATTGTTGTTGAATAAGGTGGATTTGAATGAAGATTATGCTGTGAGTTTGTATATGGGTGGATTGATGGAGGAGATTGCTATGTCAGTGAGGATGTTCAGGCCTAAAACTTTGTCTGATGCTTATTGCTTGGCCAAATTACAAGAAGCCACCTTAAATGCAACAAAAAAGAGGGCCAAACCCATTTTACCCATGCCTAAAACACCTCCAACCAATCCAGGCCTTCCAACTTCAGACCTTTCACTAACATTACAAATACTCCTCCAAAACCAGCTTTACCTGCACCACCTTCCAAACCCATTAATAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138916.p3 GENE.S_Transcript_138916~~S_Transcript_138916.p3 ORF type:complete len:287 (+),score=53.65,Retrotrans_gag|PF03732.13|2.4e-14 S_Transcript_138916:3202-4062(+)
MVNTRNTLVDEATRAFITEAINSAMATALATALDQSPRIVELSGQVTGLSLQHHELANQVNQLRGNPGNPNSISVNGYGRLSRVDFPNFNGENVKNWLYKCKLFFEVDNILEVNKVKIASIHLEDRALSWHQNFMKGRGNNWPNWDEYAEAISVRFGNAYEDPMAELKNLKQEDTVQKYQDAFELLLNKVDLNEDYAVSLYMGGLMEEIAMSVRMFRPKTLSDAYCLAKLQEATLNATKKRAKPILPMPKTPPTNPGLPTSDLSLTLQILLQNQLYLHHLPNPLIG*

Click here to download the sequence:
Link to NCBI Protein BLAST