Transcript Information: S_Transcript_138994.p1


Annotated TAIR IDAT5G08510.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2753099-2754731 | Forward length=511
E-Value4.3E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5926699580899
Replicate 20.4259225783304
Replicate 30.7476784898757
Condition 2: 8 Hour
Replicate 12.1819414803244
Replicate 22.4617671283097
Replicate 32.0986645325368
Condition 3: 24 Hour
Replicate 11.0121181540044
Replicate 20.65628798001006
Replicate 30.97382410830564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_138994.p1 GENE.S_Transcript_138994~~S_Transcript_138994.p1 ORF type:complete len:518 (+),score=99.67,PPR_2|PF13041.2|4.8e-08,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|9.5e-07,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|8.5e-07,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|24,PPR_2|PF13041.2|7.6e+02,PPR|PF01535.16|0.69,PPR|PF01535.16|0.34,PPR|PF01535.16|9.5e-09,PPR|PF01535.16|3e-06,PPR|PF01535.16|1e+04,PPR|PF01535.16|0.00096,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|13,PPR|PF01535.16|0.017,PPR|PF01535.16|4.7,PPR|PF01535.16|28,PPR|PF01535.16|1.4e+04,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|58,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|18,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|4.8e-05,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|34,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.91,PPR_1|PF12854.3|47 S_Transcript_138994:75-1628(+)
ATGCCATTAAGAACCTCTGTTGTCATGCAACACCTGAAGCAAGTCCATGCATTCACTCTCAGGAACGGCTTAGATCATACCCATATCCTCATCACAAAGTTCCTTGAAATCCCCAACATTCCTTATGCCCGCCAACTGTTCGACCTTATTCCTCAGCCAACTTCCTCCCTCTACAACAAGCTCATTCAAGCATACTCTTCTCATGGCCCTCAACACCAATGTTTTTCTCTCTACTCCCAAATGCTTCAACAGCGTTGTTTTCCTAATCCTCTTACTTTCACCTTCCTTTTTGCCGCTTGCGCTTCCCTTTTCTCCCCTAGCCTTGGTAGGATGCTTCATGCCCATTACACTAAATCCGGGTTTCAATTTGATGTTTTTGCATTGACTGCTTTGGTCGATATGTATGCCAAGTTGGGTTTGTTGGATTCAGCTCGGAAGCAATTTGATAGGATACAATTGAAAGATACACCCACATGGAATTCCATTATTGCTGGGTATGTTAGGAGTGGAAATATGGAGGAAGCCAAGAAATTGTTTCAGTTAATGCCATCTAAGAATGTGGTTTCTTGGACAACTATGATAGCTGGCTATTCACAAAATGGGCAATATGTGAATGCCCTCAACATGTTTTTGTTGATGGAGCAGGACCAAGGATTGAAGCCCAATGAGGTAACTTTATCTAGCATTCTACCAGCTTGTGCAAATCTTGGTGCATTGGAGGTAGGAGAGAGGATCGGAGAGTATGCTAGGCGAAACGGGTACATGAGTAACTTGTTTGTCAGCAATGGCTTGTTGGAAATGTATGCAAAGTGTGGGAAACTCGATTTAGCAATGCAGTTGTTCAATGAGATGGGTTGTAGGAAGAACTTGTGCTCTTGGAACTCAATGATGATGGGCTTGGCTATACATGGGAAATCCGGACAAGCTCTTTTGCTGTTCCATCACATGCTGAAAGAAGGGATGTTGCCTGATGATGTCACACTTGTTGCGGCTCTTGTTGCTTGCACACATGGTGGCATGATTACACAAGGATGGGAATTATTTGAATCAATGAAGAGCAAATTCAGTATCGCTCCCAAGCTAGAACACTATGGTTGTATGGTCGATCTCCTTGGGCGTGCAGGGAAGCTCGAAGAAGCTCATAATCTTATACAAAATATGTCAATAGAGCCTGATTCTGTGATATGGGGTACCCTTTTGGGGGCTTGCAGTTTCCATGGCAATGTTGAAGTTGCAGAAAAGGCAGCAGAGGCCCTTTTCGGGCTTGAGCCATGGAATCCTGGGAACTATGTAATTCTTTCTAATATATATGCTTCTGCTAAGAGATGGGATGGAGTTGCAAAGCTGAGAAAGACGATGAAGAGCAGCCAAATCACGAAAGGAGCTGGTTGTAGTTTTGTGGAAGACTCTGGTCAAGTTCATAAATTCATTGTAGAGGATAAATCACATCCAAGAACCAATGAGATCTATAAAGTCCTCGACAATGTGTATACCATGATGAAGAAGGTCGATGATGAAAACATTATGGATTTTGAATTTGTTCCTTTTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_138994.p1 GENE.S_Transcript_138994~~S_Transcript_138994.p1 ORF type:complete len:518 (+),score=99.67,PPR_2|PF13041.2|4.8e-08,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|9.5e-07,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|8.5e-07,PPR_2|PF13041.2|9.5,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|24,PPR_2|PF13041.2|7.6e+02,PPR|PF01535.16|0.69,PPR|PF01535.16|0.34,PPR|PF01535.16|9.5e-09,PPR|PF01535.16|3e-06,PPR|PF01535.16|1e+04,PPR|PF01535.16|0.00096,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|13,PPR|PF01535.16|0.017,PPR|PF01535.16|4.7,PPR|PF01535.16|28,PPR|PF01535.16|1.4e+04,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.00079,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|58,PPR_3|PF13812.2|5.6,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|18,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.31,PPR_1|PF12854.3|4.8e-05,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|34,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|0.7,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.91,PPR_1|PF12854.3|47 S_Transcript_138994:75-1628(+)
MPLRTSVVMQHLKQVHAFTLRNGLDHTHILITKFLEIPNIPYARQLFDLIPQPTSSLYNKLIQAYSSHGPQHQCFSLYSQMLQQRCFPNPLTFTFLFAACASLFSPSLGRMLHAHYTKSGFQFDVFALTALVDMYAKLGLLDSARKQFDRIQLKDTPTWNSIIAGYVRSGNMEEAKKLFQLMPSKNVVSWTTMIAGYSQNGQYVNALNMFLLMEQDQGLKPNEVTLSSILPACANLGALEVGERIGEYARRNGYMSNLFVSNGLLEMYAKCGKLDLAMQLFNEMGCRKNLCSWNSMMMGLAIHGKSGQALLLFHHMLKEGMLPDDVTLVAALVACTHGGMITQGWELFESMKSKFSIAPKLEHYGCMVDLLGRAGKLEEAHNLIQNMSIEPDSVIWGTLLGACSFHGNVEVAEKAAEALFGLEPWNPGNYVILSNIYASAKRWDGVAKLRKTMKSSQITKGAGCSFVEDSGQVHKFIVEDKSHPRTNEIYKVLDNVYTMMKKVDDENIMDFEFVPFT*

Click here to download the sequence:
Link to NCBI Protein BLAST