Transcript Information: S_Transcript_139116.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value3.2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64127713819712
Replicate 20.53163348331361
Replicate 30.44440327912291
Condition 2: 8 Hour
Replicate 11.5415944807566
Replicate 21.3477017252847
Replicate 31.2840872051194
Condition 3: 24 Hour
Replicate 11.3159568367828
Replicate 20.8191739123981
Replicate 30.91164015922106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139116.p1 GENE.S_Transcript_139116~~S_Transcript_139116.p1 ORF type:3prime_partial len:83 (+),score=7.61 S_Transcript_139116:792-1037(+)
ATGAAGTTCTTTAGAATTTTGGCGCCCAAGTCTATGTTTCATGCTTCTAGGAATCATTCACCAAAGCATCCTGGTTCAGATTCATTTTCTGTGTACTCCTTATTGCAACTACAGGTAGACATGGAAACAAGATGCAGTTGGATAGTGAAACTAGAATCTTTCTCTATCAGTTGGTTGGAACTTGGGGTCAGCTTCTCTTTCCAAGACCCTGGAAGGAATTTCGCTTGTGGTATGACGATCATAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139116.p1 GENE.S_Transcript_139116~~S_Transcript_139116.p1 ORF type:3prime_partial len:83 (+),score=7.61 S_Transcript_139116:792-1037(+)
MKFFRILAPKSMFHASRNHSPKHPGSDSFSVYSLLQLQVDMETRCSWIVKLESFSISWLELGVSFSFQDPGRNFACGMTIIK

Click here to download the sequence:
Link to NCBI Protein BLAST