Transcript Information: S_Transcript_139186.p1


Annotated TAIR IDAT5G27930.1
Annotated Gene NameProtein phosphatase 2C family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9958199-9960219 | Reverse length=373
E-Value7.1E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5465136728251
Replicate 28.7307295575192
Replicate 36.3119524564194
Condition 2: 8 Hour
Replicate 110.719714918773
Replicate 212.20282653076
Replicate 311.968791435952
Condition 3: 24 Hour
Replicate 110.630397848364
Replicate 213.816441281837
Replicate 314.162110494851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139186.p1 GENE.S_Transcript_139186~~S_Transcript_139186.p1 ORF type:5prime_partial len:187 (+),score=27.27 S_Transcript_139186:1-561(+)
CGGGGTGTTAATCAAGATTGTTGCATAGTATGGGAGGAATTCGGATGTCAACCTGACATGATATTTTGTGGAATTTTTGATGGGCATGGTCCTTGGGGCCATTTTGTTGCAAAGACAGTGAGGGAATCTATGCCTCCATCATTGTTATGCAACTGGCAAGAGACTCTTGCTCAAATGGCGGTTGACCCAGATTTTGACTTGGACGTGGATAAGAAGTTGCATTGGTTCAATATTTGGAAGCGTTCCTACTTGAAGACGTGTGCTACTATTGATCAAGAACTCGAGCATCATCGCAAAATCGATGCATTCTATAGTGGGACAACTGCTCTCTCGATTGTCAGACAGGTTTGGGATGTCGTATCGAATCAAGAGGCGGTGCAGATTGTATCTTCAACCCCAAACCCTGCCAAGTCCGCTAAACGACTAGTGGATCACGCAGTCCGTGCTTGGAAGCGGAAGCGACGAGGATATGCAATTGATGATATATCTACTATTTGCCTGTTTTTCCACTCCCCCTCAATTTCACCTCAGCAAGCTCAACCTGCTACTGTGACCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139186.p1 GENE.S_Transcript_139186~~S_Transcript_139186.p1 ORF type:5prime_partial len:187 (+),score=27.27 S_Transcript_139186:1-561(+)
RGVNQDCCIVWEEFGCQPDMIFCGIFDGHGPWGHFVAKTVRESMPPSLLCNWQETLAQMAVDPDFDLDVDKKLHWFNIWKRSYLKTCATIDQELEHHRKIDAFYSGTTALSIVRQVWDVVSNQEAVQIVSSTPNPAKSAKRLVDHAVRAWKRKRRGYAIDDISTICLFFHSPSISPQQAQPATVTK*

Click here to download the sequence:
Link to NCBI Protein BLAST