Transcript Information: S_Transcript_139210.p3


Annotated TAIR IDAT4G37170.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17498580-17500655 | Reverse length=691
E-Value5E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1124405661008
Replicate 21.4897703559737
Replicate 31.3046308483576
Condition 2: 8 Hour
Replicate 12.2628227667697
Replicate 22.3019265481391
Replicate 32.3988896018468
Condition 3: 24 Hour
Replicate 12.2477050536946
Replicate 21.1659838753105
Replicate 31.540896603528


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139210.p3 GENE.S_Transcript_139210~~S_Transcript_139210.p3 ORF type:5prime_partial len:311 (+),score=65.19,PPR|PF01535.16|0.037,PPR|PF01535.16|76,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|3e-05,PPR|PF01535.16|2.8e-08,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|0.012,PPR|PF01535.16|3.8e-06,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|6.3e-08,PPR_2|PF13041.2|0.00096,PPR_2|PF13041.2|37,PPR_2|PF13041.2|2.9e-08,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|19,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|4.1e-08,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.0026,PPR_3|PF13812.2|16,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|6.6e-05,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|4,PPR_3|PF13812.2|0.0054 S_Transcript_139210:1-933(+)
TCACTATCAACCCATTTACAAACCCACCAGCCATATCTGAGTAAAGCTTCCTTCAAACCCAAACCCAAACCCAAACCCAACAACAATGACAGCCTTATCAACCATTTATGCAAAGAAGGAAGATTTAAAGAAGCCATTGACATGTTATGCCACCAAAAGCGACTTAAAGAAGCTCTTCTTTTGCTATACAACCACATTGATCGTCCCTCTGCTTCTATATATACTTCCCTTTTAAACTCTTGCCTTGAGCAACGAGCCCTTGTTGAGGGTAAAAGGGTTCATGCCCATCTCAAAGATGTTAATTTTATACCTGGGGTTTTCATATCCAATCGTCTTATTGATATGTATGTGAGATGTGGGAGTTTGGATGATGCCCGGAAGGTGTTTGATGAAATGCCTCAAAGGGATTTGTGTTGTTGGAATACCATCATTAAAGGTTATGCTAAAGTGGGCAAGGTGGAGCTTGCCCGTAAGCTGTTTGATGAAATGCCTGAGAGAGATGGATTTTCGTGGACTGCAATGGTTTCTTGTTACGTCCAATGGGATAGGCCTAAGGAGGGTCTTGATTTGTTTAGGGCAATGCAGAGTGTTGGGCAGTTGAATTGTAATAAGTTCACAGTTTCTAGTGCTATTGCGGCTTCGGCTGCGATCCCGAGTTTGCTTTCTGGGAAGGAGATTCATGGACATATAGTGAGGTCAGGTTTGGATTCTGATTCTGCTGTTTGGAGTGCACTGTCTGATATGTATGCAAAGTGTGGGAGCATTCACGAAGCGAGGAGCATATTTGATAAAACTGTGGACAAAGATGTGGTTTCTTGGACTGCCATGATTGATAGATACTTTGAGGATGGGAGGTGGCAAGAGGGATTTGCATTGTTTTTGGAAATGGTCAAGTCTCGCATCAGGCTGAATTCACATTTGCAGGGGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139210.p3 GENE.S_Transcript_139210~~S_Transcript_139210.p3 ORF type:5prime_partial len:311 (+),score=65.19,PPR|PF01535.16|0.037,PPR|PF01535.16|76,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|3e-05,PPR|PF01535.16|2.8e-08,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|0.012,PPR|PF01535.16|3.8e-06,PPR_2|PF13041.2|0.063,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|6.3e-08,PPR_2|PF13041.2|0.00096,PPR_2|PF13041.2|37,PPR_2|PF13041.2|2.9e-08,PPR_1|PF12854.3|0.0031,PPR_1|PF12854.3|19,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|4.1e-08,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.0026,PPR_3|PF13812.2|16,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|6.6e-05,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|4,PPR_3|PF13812.2|0.0054 S_Transcript_139210:1-933(+)
SLSTHLQTHQPYLSKASFKPKPKPKPNNNDSLINHLCKEGRFKEAIDMLCHQKRLKEALLLLYNHIDRPSASIYTSLLNSCLEQRALVEGKRVHAHLKDVNFIPGVFISNRLIDMYVRCGSLDDARKVFDEMPQRDLCCWNTIIKGYAKVGKVELARKLFDEMPERDGFSWTAMVSCYVQWDRPKEGLDLFRAMQSVGQLNCNKFTVSSAIAASAAIPSLLSGKEIHGHIVRSGLDSDSAVWSALSDMYAKCGSIHEARSIFDKTVDKDVVSWTAMIDRYFEDGRWQEGFALFLEMVKSRIRLNSHLQGF*

Click here to download the sequence:
Link to NCBI Protein BLAST