Transcript Information: S_Transcript_139368.p2


Annotated TAIR IDAT3G15190.1
Annotated Gene Namechloroplast 30S ribosomal protein S20, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5116216-5117412 | Forward length=202
E-Value1.1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.108357936902
Replicate 24.9247298119453
Replicate 34.7753513073609
Condition 2: 8 Hour
Replicate 13.8081054137737
Replicate 25.7927108085006
Replicate 34.9483217654421
Condition 3: 24 Hour
Replicate 13.7058284492972
Replicate 27.0824411176086
Replicate 37.2062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139368.p2 GENE.S_Transcript_139368~~S_Transcript_139368.p2 ORF type:complete len:112 (+),score=23.11,Ribosomal_S20p|PF01649.14|8.4e-11 S_Transcript_139368:2153-2488(+)
ATGACATGTGATACTGATTCATTTAAATTGTGTATTTCTTTGTTGATTTCAACTTTTGTTAGTTGTCAAATTTTCTTCCTATACAAAACATCCTGTCAACTTCAGGTGTTGGAGGCCTTGGAGGTTCTCAAGAAGAAGAGTGATGCAGCACCTGAAGAAATCATACCAATAGAGAAGCTGATTGCGGAGGCTTATTCCTCGATTGATAAGGCAGTCGTGAAGCGAACCCTACACAGAAACACTGCTGCAAACCGTAAATCTCGGCTTGCTAGAAACAAGAAGGCTGTCGAGATTCACCATGGCTGGTACACCCCTTCAGCTTCAGCAACTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139368.p2 GENE.S_Transcript_139368~~S_Transcript_139368.p2 ORF type:complete len:112 (+),score=23.11,Ribosomal_S20p|PF01649.14|8.4e-11 S_Transcript_139368:2153-2488(+)
MTCDTDSFKLCISLLISTFVSCQIFFLYKTSCQLQVLEALEVLKKKSDAAPEEIIPIEKLIAEAYSSIDKAVVKRTLHRNTAANRKSRLARNKKAVEIHHGWYTPSASATV*

Click here to download the sequence:
Link to NCBI Protein BLAST