Transcript Information: S_Transcript_139403.p1


Annotated TAIR IDAT2G30780.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13116547-13118059 | Forward length=452
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.004264197554
Replicate 22.9659882188168
Replicate 33.4362645061426
Condition 2: 8 Hour
Replicate 14.4260244054427
Replicate 24.6959776625841
Replicate 33.6196722348081
Condition 3: 24 Hour
Replicate 12.0093171135216
Replicate 21.8173811169712
Replicate 32.1414943362834


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139403.p1 GENE.S_Transcript_139403~~S_Transcript_139403.p1 ORF type:complete len:424 (+),score=61.52,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|24,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|4.2e+03,PPR_2|PF13041.2|8.5,PPR|PF01535.16|13,PPR|PF01535.16|35,PPR|PF01535.16|2.2,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|79,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|12,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|88,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|98,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|15 S_Transcript_139403:116-1387(+)
ATGAGGTTTGTGCGTAGGGTTTTAGCTGCAACTGAAAAGGTTTTATGCTCAAGCCCTCAACTTCCTCACAAGCTTGCTAGTAATTCACAACAACCCTTTTGCAGTTACCCCTCAATCTCCAACAATTTGATACAGAGATTGCTCAAAGAACCCAATTCACGCATCAAAGCAATTCTTGATTCTGAACAGAATTCAACTCTTCAAAGTTTCGAATTTTCTTGGCATTCCTTTGTTTCTGCTCTCAATTCTTCTTCTACAGCTAAGGCTGTCCAGGCTTTAGAATGGAGATTAGAGAAAATGCTGAACGAAAACGAGAGAGATCAGGAGCAATATTCTGATCTAATATCTCTGTGTGGAGAAACTTGCAGTCTTTCACTAGCAATGCGTGTGTTTATGGCAATGGAGTCTATTGGAGTGAAACCTACTTCTGATGTCTTTAATTCGCTGATTTTGGTTTCTTTCTCTTTGAGAAATGAAGTGACGGCTATCAGCTTGTTTGAGATTATGGAGAGGTCTCAAGACTATAAACCAAACCCTAAAACTTATAATGCTTTCATCTCTATTTATTCTAAATTCGGAAATGCTAAGGCCATGCAAGCATGGGCCTCGGCTAAAAGAGCTGCTGGATTTGCTGCTGATTTGCAGTTCTATGAATCTCTAATTTCAGGCTATGTTCAAGTCAGACGTTTCGATAGTGCTGAGAAGTGCTACAAAGAAATGATATGGTCAGGATTTATACCCAGTATACACATCTTAGATAAAATGGTTGATGGGCTTTGTGATCAGCGGAATTTTGTAGGAGCTAAAGAGTTTGTACTATATATGATCGACAACCAATGGAAAATCAGTACTCATATAGCTAAAAGAGTTGTAGGTTTGTGTTCAGCAATAGGGAAAATTGAAAGCATGGAGGAGCTTTTCCAAATCCTAACAGCATCAAATCAAAGTCCAGAAGTTTTGTCACAAATACATTGTGGGATTATATGTATGCATGCTAAGGCAGATAGACTAGATGATGTGGAATATTCCGTTGGAAGGATGTTGAAACATAGGATATCATTTCAATCCGCTGTAGATGTCAATGTAGTAATCTCTTCTTACTTCAGGCGGTCAGCATATGACAGGCTGGAGCTGTTTTTGAAGCATGTTAAGGGCTCTTGCCAGTTCACGAAATCAACCTATGATTTGTTGGTTACAGGTTATCGGAAAGCTGGATTATCTGAAAAATTGGATGCGTTGCTTAAGGACGTTAGCTTAGGTGGAATGTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139403.p1 GENE.S_Transcript_139403~~S_Transcript_139403.p1 ORF type:complete len:424 (+),score=61.52,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|1.2e-05,PPR_2|PF13041.2|24,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|4.2e+03,PPR_2|PF13041.2|8.5,PPR|PF01535.16|13,PPR|PF01535.16|35,PPR|PF01535.16|2.2,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|79,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|12,PPR_3|PF13812.2|9.6e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|88,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|98,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|15 S_Transcript_139403:116-1387(+)
MRFVRRVLAATEKVLCSSPQLPHKLASNSQQPFCSYPSISNNLIQRLLKEPNSRIKAILDSEQNSTLQSFEFSWHSFVSALNSSSTAKAVQALEWRLEKMLNENERDQEQYSDLISLCGETCSLSLAMRVFMAMESIGVKPTSDVFNSLILVSFSLRNEVTAISLFEIMERSQDYKPNPKTYNAFISIYSKFGNAKAMQAWASAKRAAGFAADLQFYESLISGYVQVRRFDSAEKCYKEMIWSGFIPSIHILDKMVDGLCDQRNFVGAKEFVLYMIDNQWKISTHIAKRVVGLCSAIGKIESMEELFQILTASNQSPEVLSQIHCGIICMHAKADRLDDVEYSVGRMLKHRISFQSAVDVNVVISSYFRRSAYDRLELFLKHVKGSCQFTKSTYDLLVTGYRKAGLSEKLDALLKDVSLGGMS*

Click here to download the sequence:
Link to NCBI Protein BLAST