Transcript Information: S_Transcript_139405.p1


Annotated TAIR IDAT2G30780.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13116547-13118059 | Forward length=452
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57163964466975
Replicate 20.8951489796605
Replicate 30.66024114857759
Condition 2: 8 Hour
Replicate 11.4250857491163
Replicate 21.4950161382156
Replicate 30.71222402498744
Condition 3: 24 Hour
Replicate 10.78203640181125
Replicate 20.6490829091078
Replicate 30.36117486021646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139405.p1 GENE.S_Transcript_139405~~S_Transcript_139405.p1 ORF type:complete len:419 (+),score=62.79,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|7.7e+02,PPR_2|PF13041.2|7.2,PPR|PF01535.16|13,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|2.1,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|2.5e+02,PPR_3|PF13812.2|9.5e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|24,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|6.2e+03 S_Transcript_139405:116-1372(+)
ATGAGGTTTGTGCGTAGGGTTTTAGCTGCAACTGAAAAGGTTTTATGCTCAAGCCCTCAACTTCCTCACAAGCTTGCTAGTAATTCACAACAACCCTTTTGCAGTTACCCCTCAATCTCCAACAATTTGATACAGAGATTGCTCAAAGAACCCAATTCACGCATCAAAGCAATTCTTGATTCTGAACAGAATTCAACTCTTCAAAGTTTCGAATTTTCTTGGCATTCCTTTGTTTCTGCTCTCAATTCTTCTTCTACAGCTAAGGCTGTCCAGGCTTTAGAATGGAGATTAGAGAAAATGCTGAACGAAAACGAGAGAGATCAGGAGCAATATTCTGATCTAATATCTCTGTGTGGAGAAACTTGCAGTCTTTCACTAGCAATGCGTGTGTTTATGGCAATGGAGTCTATTGGAGTGAAACCTACTTCTGATCTCTTTAATTCGCCGATTTTGGTTTCCTTCTCTTTGAGAAATGCAGTGACGGCTATCAGCTTGTTTGAGATTATGGAGAGGTCTCAAGACTATAAACCAAACCCTAAAACTTATAATGCTTTCATCTCTATTTATTCTAAATTCGGAAATGCTAAGGCCATGCAAGCATGGGCCTCGGCTAAAAGAGCTGCTGGATTTGCTGCTGATTTGCAGTTCTATGAATCTCTAATTTCAGGCTATGTTCAAGTCAGATGTTTTGATAGTGCTGAGAAGTGCTACAAGGAAATGATATCGTCAGGATTTATACCCAGTATACACATCTTAGATAAAATGGTTGATGGGCTTTGTGATCAGCGGAATTTTGCAGGAGCTAAAGAGTTTGTATTATATATGCTCGACAACCGTTGGAAAATCAGTACTCATATAGCTAAAAGAGTTGTAGGTTTGTGTTCAGCAATAGGGAAAATTGAAAGCATGGAGGAGCTTTTCCAAATCCTAACAGCATCAAATCAAAGTCCAGAAGTTTTGTCACAAATACATTGTGGGATTATATGTATGCATGCTAAGGCAGATAGACTAGATGATGTGGAATATTCCGTTGGAAGGATGCTTAAACATGGGATATCATTTCAATCAGCTGTGGATGTCAATGTAGTAATCTCTTCTTACTTCAGGCGGTCAGCATATGACAGGCTGGAGCTGTTTTTGAAGCATGTTAAGGGCTCTTGCCAGTTCACGAAATCAACCTATGATTTGTTGGTTACAGGTTACGGAAAGCTGGATTATCTGAAAAATTGGATGCGTTGCTTAAGGACGTTAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139405.p1 GENE.S_Transcript_139405~~S_Transcript_139405.p1 ORF type:complete len:419 (+),score=62.79,PPR_2|PF13041.2|0.52,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|3e+03,PPR_2|PF13041.2|7.7e+02,PPR_2|PF13041.2|7.2,PPR|PF01535.16|13,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|2.1,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.4e+03,PPR|PF01535.16|2.5e+02,PPR_3|PF13812.2|9.5e+03,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|5.5,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|24,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|6.2e+03 S_Transcript_139405:116-1372(+)
MRFVRRVLAATEKVLCSSPQLPHKLASNSQQPFCSYPSISNNLIQRLLKEPNSRIKAILDSEQNSTLQSFEFSWHSFVSALNSSSTAKAVQALEWRLEKMLNENERDQEQYSDLISLCGETCSLSLAMRVFMAMESIGVKPTSDLFNSPILVSFSLRNAVTAISLFEIMERSQDYKPNPKTYNAFISIYSKFGNAKAMQAWASAKRAAGFAADLQFYESLISGYVQVRCFDSAEKCYKEMISSGFIPSIHILDKMVDGLCDQRNFAGAKEFVLYMLDNRWKISTHIAKRVVGLCSAIGKIESMEELFQILTASNQSPEVLSQIHCGIICMHAKADRLDDVEYSVGRMLKHGISFQSAVDVNVVISSYFRRSAYDRLELFLKHVKGSCQFTKSTYDLLVTGYGKLDYLKNWMRCLRTLA*

Click here to download the sequence:
Link to NCBI Protein BLAST