Transcript Information: S_Transcript_139430.p1


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3027343261977
Replicate 21.3885671749485
Replicate 30.90279127681961
Condition 2: 8 Hour
Replicate 10.74564301808157
Replicate 21.4080184458569
Replicate 30.74530935681753
Condition 3: 24 Hour
Replicate 11.2220913840892
Replicate 20.47546457852477
Replicate 31.940157261932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139430.p1 GENE.S_Transcript_139430~~S_Transcript_139430.p1 ORF type:internal len:143 (+),score=28.44,VPS13|PF16908.1|6.6e-18 S_Transcript_139430:3-428(+)
TATGTGAGCAAGATTGTGGAGATTCATGGTCTGGGAATTCATTGTAGCAATATACAAGGGTCTTTCGATTTCATGTGTCGTGATGGTACTGTTGAGAGTCAAAAATGGCACGATGCACTAAGTGACGTTGGTAAATATGACTATATTGTGGTGCCGTTTGATGCATCTTTTCTGGTGATAAATTCTGGAAAGCTTGAGGGGGATGCTCCACAATATTCTGTTACTGCTGAGCTGACAAAACTGGTAATGACTATAAGTTGTGCTCAACTGCAGCATATTTTGGAGTTTTTGGAGTATATCAACACATGTCAGCTGTGGGAAAAGTATGGGCGCTATCGTCCATGGGGTTGTCCATTGTCAAAGAAATTGAAGGGGTGGCACAAGGTTTGGTGGCGTTATGCTCAAGAATCAGTTTGTTCTGAAGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139430.p1 GENE.S_Transcript_139430~~S_Transcript_139430.p1 ORF type:internal len:143 (+),score=28.44,VPS13|PF16908.1|6.6e-18 S_Transcript_139430:3-428(+)
YVSKIVEIHGLGIHCSNIQGSFDFMCRDGTVESQKWHDALSDVGKYDYIVVPFDASFLVINSGKLEGDAPQYSVTAELTKLVMTISCAQLQHILEFLEYINTCQLWEKYGRYRPWGCPLSKKLKGWHKVWWRYAQESVCSEV

Click here to download the sequence:
Link to NCBI Protein BLAST