Transcript Information: S_Transcript_139475.p1


Annotated TAIR IDAT3G49000.1
Annotated Gene NameRNA polymerase III subunit RPC82 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18162903-18165846 | Forward length=523
E-Value1.2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1309413217859
Replicate 23.5440227569764
Replicate 33.6718569578209
Condition 2: 8 Hour
Replicate 11.8334045974006
Replicate 22.1258317711957
Replicate 32.8935539735269
Condition 3: 24 Hour
Replicate 13.7561338128624
Replicate 23.2303622835065
Replicate 33.6520607283426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139475.p1 GENE.S_Transcript_139475~~S_Transcript_139475.p1 ORF type:3prime_partial len:442 (+),score=79.92,HTH_9|PF08221.7|3.2e-16,HTH_9|PF08221.7|68,HTH_9|PF08221.7|1e+03,HTH_9|PF08221.7|3.1e+03,RNA_pol_Rpc82|PF05645.9|3.6e-10 S_Transcript_139475:137-1459(+)
ATGACAATGGTAACAGAGTACGGCATCAAACTCGCCGTCCACCTCATTACCACCGACTTCGGAAACCTCGTTGCCAAAGTGGCAGAATGTTTACTTCGAAGAGGAGCCCTACCGAAGCGTCTAATAAATCAGTTCACCGGCATCGATGATCAAAATAAAGTCAAGAAATGCCTTTGGGTTTTAATCCAACACAATTGCGTCCAAGCTTTCGCCCTCGAACAAGAAGGTGGTGCTAGAGAAGCTGACAAGGTAGATACGCAGTACATGGCATTGTTCAACAATATAATTCATCGCTTGAGGTTTCCAAAGTTCATGAGTACTGTGTCCAAGGAGGTGGATAAAGAAGCTTTAGAGCTTTTTCAAGGGTTGGTGCAGCACGGCAGACTTTCACTGACACAAATGTTGGATAGAGCTGTGGATTGCTCAAATGAAGGAAATGCTAGTAAAGATAATTACCGAGAAAGCTTTATCAAACTTGTCAAGAGACGCTTTGTGGAACATTGCCCTGCTGCTGAACCATTAATTTCTTTAGTAACAGAAGATGAAAGTAATCCGAAGAAAGGCAGGTCTAAGATTTTCAGAAAAGAGGTGACTCTTGAAGAACGTGCTTTGGCTGCTGCAACTCCCATGGATGCCGAGAGATTTTCCATTGTAACAGACCCCAAACATGATTCTAATGAAGACCAAACCGTGAAGGACTTTCCTAGTGTGAAAGTTGGGGAGAAGAGGAAGCAAGACTCTCTGCAATGGGATGGTGAGCTGGATACTATGGGGGGAAAGAAAGAACCTCTTTGGCGTGTGAGTTTTGATGAATTCGTTAATTGTCTTAGAATAAAGGCCTGTGTTGAGTATGCAAGACAAGAGTATGATAATACTGCTGCGATGATTTTAAATTGCATGTTGGAGGGTACTAATCGTTCAGAAACTACAGTGTCCTTGTCCCTGGAATCAATTTTTGAGGAGGTTATCAAGACTGAAGAAGGTCGTACCATGAATTTGGAGCGTGTTAGATATTCTCTTGAACAATTGCATTTTTGTTCTGAAGAAGATGACGTGTACAGCGTTAATTTGAGGGACATCATTAAGCAAGCTCAGACAGAAGAGGTTGAGTCTATTGTGTTGAAGAGATATGGCCAAGAGGCTTTCAGGATATTCAGGTCATTGTCAAATGGGCGCCAACTGGATACTGATAAGATTTCAGAAAAGACCTTTGTAGACAAGAAGGATACACCACAGTATTTATTTAGGCTTTGGAAAGATAATTACGTGCAAATGGAGAAAATTACTACAGGAGGCCCCAAACAAACAGACTTCTTTTTGTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139475.p1 GENE.S_Transcript_139475~~S_Transcript_139475.p1 ORF type:3prime_partial len:442 (+),score=79.92,HTH_9|PF08221.7|3.2e-16,HTH_9|PF08221.7|68,HTH_9|PF08221.7|1e+03,HTH_9|PF08221.7|3.1e+03,RNA_pol_Rpc82|PF05645.9|3.6e-10 S_Transcript_139475:137-1459(+)
MTMVTEYGIKLAVHLITTDFGNLVAKVAECLLRRGALPKRLINQFTGIDDQNKVKKCLWVLIQHNCVQAFALEQEGGAREADKVDTQYMALFNNIIHRLRFPKFMSTVSKEVDKEALELFQGLVQHGRLSLTQMLDRAVDCSNEGNASKDNYRESFIKLVKRRFVEHCPAAEPLISLVTEDESNPKKGRSKIFRKEVTLEERALAAATPMDAERFSIVTDPKHDSNEDQTVKDFPSVKVGEKRKQDSLQWDGELDTMGGKKEPLWRVSFDEFVNCLRIKACVEYARQEYDNTAAMILNCMLEGTNRSETTVSLSLESIFEEVIKTEEGRTMNLERVRYSLEQLHFCSEEDDVYSVNLRDIIKQAQTEEVESIVLKRYGQEAFRIFRSLSNGRQLDTDKISEKTFVDKKDTPQYLFRLWKDNYVQMEKITTGGPKQTDFFLW

Click here to download the sequence:
Link to NCBI Protein BLAST