Transcript Information: S_Transcript_139510.p1


Annotated TAIR IDAT3G29230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:11188803-11190605 | Forward length=600
E-Value1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5051054683136
Replicate 22.6089674026881
Replicate 31.7067827738037
Condition 2: 8 Hour
Replicate 14.2212212195867
Replicate 23.5656930993909
Replicate 34.1097392554591
Condition 3: 24 Hour
Replicate 11.5162258463909
Replicate 21.6313283396857
Replicate 31.7506303314605


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139510.p1 GENE.S_Transcript_139510~~S_Transcript_139510.p1 ORF type:complete len:389 (+),score=93.88,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|6e-09,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|4.1,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|58,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|7.9e+02,PPR|PF01535.16|0.026,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|3.6e+03,PPR|PF01535.16|0.27,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0022,PPR|PF01535.16|22,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|5.8e-06,PPR_1|PF12854.3|2e-07,PPR_1|PF12854.3|5.7e+02,PPR_1|PF12854.3|8.2,PPR_1|PF12854.3|0.00061,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.00012,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|4.2e+03 S_Transcript_139510:66-1169(+)
ATGGAGTATGCTCGTAGGCTGTTTGATAGAATGCCCAACAGAGATGTTGCATCTTGGACATCCATGATATCTGGGTACAGTAATGTAGGGAAGCTGAATGAGTCGATAGTCTTATTTGGGCAGATGAAGTTGGAGGGGCTGGAGCCGAATGTTTTCACATGGAATGCAATTATGGCTGGGCATGCTCAGAGTGGGGATTGCAATGGGGCTCTCGAGCTTTTCTTGAGGATGACTAGAGAAGGAATGTTTCCTGACTTGGTTACTTGGAATGCCTTGATCTCTCGTTTTGCAAGGGGCAATAAACCGGCTGAGGCTTTGAAATTCTTCAGGGAGATGTTAGTTGTTGCTAAAATCCGACCTAATCATGTAACTCTAACAGGGCTGCTTCCAGTGTTTGGATTGATGGGCTCTATACAAAAAGGGAAAGAGCTTCATAGCTTGATATATAGATTAGGGCTTGAGGTCAATGTCTATGTGGCTAGTGCTCTTATTGACATGTACTCAAAATGTGGAAGTATTAAGGCTGCTAGAAGTGTATTTGAGGGGACTCTGATCCGGAATGTTGCAATATGGAATACTATAATTGGATGCCTTGGAAAGCATGGTGTAGTTGATGAGTCACTCCAGTTGTTTGAAACAATGCAGGAACAAGGTTTCCAGCCAAATGAAGTGACTTTAGTTTGTGTTCTTTCTGCTTGCAGCCAGGGTGGGTTAGTAGAGACGGGTATGGAAATCTTTAGGTCCATGGAGGATAAGTATGCTCTTTGTACCAACAAAGAGCACTATGCTTGTGTTGTTGACCTTTTATGCCGAGGTGGAAAGGTGGAAGAGGCTTATGAATTGGTGAAAAGAATGCCAATGGAACCTACAGAATCCATACTCGGGGCTTTCTTCAATGGGTGCAAAATCCACGAAAGAAGAGATCTTGCCAAACAAATGGTTGATGATCTCCTCAAAGCAGATTTGAAGAAGCCTGGGGCTTTTGTTACATTGTCAAATATATTTGCAGCTGAAGAGGAGTGGCAAGAAGTTGACAAGGTGAGGAAGTTGATGAAGGGCAAAGGGGTATACAAGAAGCCTGGCTTCAGCCTAGCTGACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139510.p1 GENE.S_Transcript_139510~~S_Transcript_139510.p1 ORF type:complete len:389 (+),score=93.88,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|6e-09,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|4.1,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|58,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|7.9e+02,PPR|PF01535.16|0.026,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|2.4e-06,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|3.6e+03,PPR|PF01535.16|0.27,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0022,PPR|PF01535.16|22,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|5.8e-06,PPR_1|PF12854.3|2e-07,PPR_1|PF12854.3|5.7e+02,PPR_1|PF12854.3|8.2,PPR_1|PF12854.3|0.00061,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.00012,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|4.2e+03 S_Transcript_139510:66-1169(+)
MEYARRLFDRMPNRDVASWTSMISGYSNVGKLNESIVLFGQMKLEGLEPNVFTWNAIMAGHAQSGDCNGALELFLRMTREGMFPDLVTWNALISRFARGNKPAEALKFFREMLVVAKIRPNHVTLTGLLPVFGLMGSIQKGKELHSLIYRLGLEVNVYVASALIDMYSKCGSIKAARSVFEGTLIRNVAIWNTIIGCLGKHGVVDESLQLFETMQEQGFQPNEVTLVCVLSACSQGGLVETGMEIFRSMEDKYALCTNKEHYACVVDLLCRGGKVEEAYELVKRMPMEPTESILGAFFNGCKIHERRDLAKQMVDDLLKADLKKPGAFVTLSNIFAAEEEWQEVDKVRKLMKGKGVYKKPGFSLADE*

Click here to download the sequence:
Link to NCBI Protein BLAST