Transcript Information: S_Transcript_139513.p1


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.872271443681
Replicate 21.9956292062074
Replicate 30.74141652597389
Condition 2: 8 Hour
Replicate 13.6435340240328
Replicate 21.798741599174
Replicate 32.7849851142187
Condition 3: 24 Hour
Replicate 11.317279406468
Replicate 21.5944390053712
Replicate 31.013951533874


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139513.p1 GENE.S_Transcript_139513~~S_Transcript_139513.p1 ORF type:3prime_partial len:199 (+),score=31.16,PPR_2|PF13041.2|56,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|1.5,PPR|PF01535.16|0.69,PPR|PF01535.16|0.19,PPR|PF01535.16|0.01,PPR|PF01535.16|0.12,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|7.3,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|5.7 S_Transcript_139513:131-724(+)
ATGAGATTTTCATCAGTGTTTATGCCACTCAAGGTGTCATACAATGAACTCAGTTCAATATTACAAAGGTGCACCAAATTGAAAGCTTCAAAACCCGCTAAGCAAATTCATGGGATGCTAATTGCAAGTGGGTTTGATTTGGCCATCATGTCACTGGACGCTAAGCTCCTGGGTGTCTATGTAAGTTGTGGTAATCTGGGGTATGCACACCAACTGTTTGATAAAATGCCTAGCCCAAATGTTTTCGCTTTGAATTGGATGATTTCAGCAATGGCATTTCATGGGCATTACCAGAAGGCACTTGAGTATTTTGCTTTGATTCAAAAGATGGGAAATTTACCCAATAAATATACTTTTGCGATGGTGTTAAAGGCTTGTATTGGTTTGTTGGATCTGAACAAGGGAAGAGAACTGCATGCTGTGATATATAAAATGGGTTTTGAATCTGATGTTTTGGTGTGTAATGCTTTGCTTGATATGTACAATAAATGTGCTAATATGGAGTATGCTCGTAGGCTGTTTGATAGAATGCCCAACAGAGATGTTGCATCTTGGACATCCATGATATCTGGGTACAGTAATGTAGGGAAGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139513.p1 GENE.S_Transcript_139513~~S_Transcript_139513.p1 ORF type:3prime_partial len:199 (+),score=31.16,PPR_2|PF13041.2|56,PPR_2|PF13041.2|1.4e-08,PPR_2|PF13041.2|0.0013,PPR_2|PF13041.2|1.5,PPR|PF01535.16|0.69,PPR|PF01535.16|0.19,PPR|PF01535.16|0.01,PPR|PF01535.16|0.12,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|7.3,PPR_1|PF12854.3|5.1e+02,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|5.7 S_Transcript_139513:131-724(+)
MRFSSVFMPLKVSYNELSSILQRCTKLKASKPAKQIHGMLIASGFDLAIMSLDAKLLGVYVSCGNLGYAHQLFDKMPSPNVFALNWMISAMAFHGHYQKALEYFALIQKMGNLPNKYTFAMVLKACIGLLDLNKGRELHAVIYKMGFESDVLVCNALLDMYNKCANMEYARRLFDRMPNRDVASWTSMISGYSNVGKL

Click here to download the sequence:
Link to NCBI Protein BLAST