Transcript Information: S_Transcript_139515.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1397387927783
Replicate 21.1086828923374
Replicate 30.92677065746736
Condition 2: 8 Hour
Replicate 11.7503251684079
Replicate 21.4614775493289
Replicate 31.8923616801742
Condition 3: 24 Hour
Replicate 10.84159517635455
Replicate 20.79721950268559
Replicate 31.1406954756083


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139515.p1 GENE.S_Transcript_139515~~S_Transcript_139515.p1 ORF type:complete len:597 (+),score=93.98,LRR_4|PF12799.3|0.46,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|7.8e+02,LRR_4|PF12799.3|23,LRR_4|PF12799.3|4.3 S_Transcript_139515:82-1872(+)
ATGGCTACACCTCTTCATTCTCTCTTTCAAATCAGTTTATCACTAGCACAACAGCTAGAACTTCTACGAGATGACAAAAAGCGCGAAAATATTCCTGGTGATCAAGTCTTGGAAAAGACTAAGGAGTGCATAAAAAAATTGGAACAATGGGATACTGATAAAGATCAAGTTCTTATAGTTGAGTCCAAGAAGAAGGTTTGGGAGAAACTAGCTGAAACAATTCAACAAGAGTTCATCAAGTATGACAAAAAAAACGAATCTGAATACCATAAATTGCTCGAATCTCCTTGCTTTAAATCCCTTCAACAAGAACCAACAAAACAACAAGAAGATAGTTCTAATATCAATTCTGATGATGACAAATTCGAGGATTTTGAAGGTAAATTCAACAAACTTCGTGATAAAGAGAAAGAATGTTTATATTGGTTCTCTTTGTTTCCTAAGAAAACAGACATAAAAAGGAAAGAATTGATATGGTGGTGGGAAGAGAGTGAATTGCCAATACTTGATTTTCATAATAATGAAGGTGAAGAAATACTTGGTAAGCTTTATACTAAGGGCTTTATTAAACGTGACAAAAGTAATAAAAGGATACCAGTCACGTACACATTGCATGAAAATATTTGGTTGGACTTAAAAAAGAAAGCAAGTAAATGGTGTGAGAATGTGTGTGTGCTTGAAAAAAACGACAAAACAACTGAATTATGGAAGCCAGTTGGTGAACATGGGGAAAAAATTGATATAAAAGATAGTCAATTGTATATCATGATCAACATAAGTGCAAATAAACTTGGTAAAGATATAGACATGCCAGGTGGTGTACGTTTTCTTCGCATTCTATTATTTGGAAGCTGGAAGCATGGGGAACAAATGGATTATATTGAAGTGGAAGATCTTGATTGGCTTATTTCTAAATGCTGTAATACGGATGAGGTAAAGTACTTGAGCCTTCGAGGGATAACAGGGATAGTGAAGTTGTCAAAAAAAATTTACGAACTTGTAAATCTAAGGTTCTTGGATGTGAGGGCATGTAACAACTTGGAATCAATTCCAGAGGGGATTGAAGGGCTAAAACAACTTGTACATTTGGATTTGTCTGAATGTTATCTTCTTGATCAAGTTCCAAAAGGGATTTCTCAGTTATATAAACTTCAAGTTTTAAAGGGGTTTGTGATTAAACAAGATCCACCAAAAGTACACAAAATCAACAACAACAATAATACTAAAGATTTTGGAGATAATACTTCATGTACATTCAAGGATTTGTCCCAATTGAAGCTCTTGAGGAAACTTACAATTCGTACAAGAAGAATGAATTTTCCAACAAGTGATGATCTTCACACTTTATCCACAATGATTGACCTCAATAGTTTGGGAATTAAATGGGTGACAAGTTCTACTTCTAATACTAATGATCATACTATATCAATTAATGAAGATGAAGATGATGATGATTCAGGAAGATTTCCCCCGAACCTCGAAAAGCTCGACCTCCAAGCCATGCCTAAACAAGTGAAAAACCGAGTATTCGGGCGCATTCGAGAGACATCAATTAGCCTGAGAAAACTCTCCATAAGAGGAGGGGATATCAATGACCTTGGTCCAATGGAGTATTGTTTTGAGGGTGTTGAGTTTGTGCGTCTTAGATACTTGGAGGAACTATCAATGACTTGGAATGAGTTCATACACTCTTTCCCTAACTTGACTCGCTTGGAGATGCACCGATGTCCTAAGCTCGAGAGCATGTCATTTCCATGTGATAATAATGGTGTCTTTCAAAGAGCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139515.p1 GENE.S_Transcript_139515~~S_Transcript_139515.p1 ORF type:complete len:597 (+),score=93.98,LRR_4|PF12799.3|0.46,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|7.8e+02,LRR_4|PF12799.3|23,LRR_4|PF12799.3|4.3 S_Transcript_139515:82-1872(+)
MATPLHSLFQISLSLAQQLELLRDDKKRENIPGDQVLEKTKECIKKLEQWDTDKDQVLIVESKKKVWEKLAETIQQEFIKYDKKNESEYHKLLESPCFKSLQQEPTKQQEDSSNINSDDDKFEDFEGKFNKLRDKEKECLYWFSLFPKKTDIKRKELIWWWEESELPILDFHNNEGEEILGKLYTKGFIKRDKSNKRIPVTYTLHENIWLDLKKKASKWCENVCVLEKNDKTTELWKPVGEHGEKIDIKDSQLYIMINISANKLGKDIDMPGGVRFLRILLFGSWKHGEQMDYIEVEDLDWLISKCCNTDEVKYLSLRGITGIVKLSKKIYELVNLRFLDVRACNNLESIPEGIEGLKQLVHLDLSECYLLDQVPKGISQLYKLQVLKGFVIKQDPPKVHKINNNNNTKDFGDNTSCTFKDLSQLKLLRKLTIRTRRMNFPTSDDLHTLSTMIDLNSLGIKWVTSSTSNTNDHTISINEDEDDDDSGRFPPNLEKLDLQAMPKQVKNRVFGRIRETSISLRKLSIRGGDINDLGPMEYCFEGVEFVRLRYLEELSMTWNEFIHSFPNLTRLEMHRCPKLESMSFPCDNNGVFQRAP*

Click here to download the sequence:
Link to NCBI Protein BLAST