Transcript Information: S_Transcript_139516.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value3E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25611861841228
Replicate 30.09175490588856
Condition 2: 8 Hour
Replicate 10
Replicate 20.25970636895205
Replicate 30.070699328706406
Condition 3: 24 Hour
Replicate 10.072454008260677
Replicate 20.075170187649577
Replicate 30.50193123194261


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139516.p1 GENE.S_Transcript_139516~~S_Transcript_139516.p1 ORF type:complete len:603 (+),score=91.72,LRR_4|PF12799.3|6.1e+03,LRR_4|PF12799.3|8.9e-05,LRR_4|PF12799.3|7.2e+02,LRR_4|PF12799.3|2.4e+02,LRR_4|PF12799.3|25 S_Transcript_139516:82-1890(+)
ATGGCTACACCTCTTCATTCTCTCTTTCAAATCAGTTTATCACTAGCACAACAGCTAGAACTTCTACGAGATGACAAAAAGCGCGAAAATATTCCTGGTGATCAATTCTTGGAAAATATTAAAGAGTGCATAAAAAGATTGGAACAATGGGATACTGATAAAGATCAAGTTCTTATAGTTGAGTCCAAGAAGAAGGTTTGGGAGAAACTAGCTGAAACAATTCAACAAGAGTTCATCAAGTATGACAAAAAAAACGAATCTGAATACCATAAATTGCTCGAATCTCCTTGCTTTAAATCCCTTCAACAAGAACCAACAAAACAACAAGAAGATAGTTCTAATATCAATTCTGATGATGACAAATTCGAGGATTTTGAAGGTAAATTCAACAAACTTCGTGATAAAGAGAAAGAATGTTTATATTGGTTCTCTTTGTTTCCTAAGAAAACAGACATAAAAAGGAAAGAATTGATATGGTGGTGGGAAGAGAGTGAATTGCCAATACTTGATTTTCATAATAATGAAGGTGAAGAAATACTTGGTAAGCTTTATACTAAGGGCTTTATTAAACGTGACAAAAGTAATAAAAGGATACCAGTCACGTACACATTGCATGAAAATATTTGGTTGGACTTAAAAAAGAAAGCAAGTAAATGGTGTGAGTATGTGTGTGTGCTTGAAAAAAAGGACAAAACAACTAAATTATTGAAGCCAGTTGTTGAAAATGGGGAAAAAGCTGATATAACAGTTGGTACTGGGTTGTATATCATGATCAACATAAGTGCAAATAAACTTGATAAAGATATAGAAATGCCAGGTGGTGTTTTTTTTCGCATTCTATTATTTGGAAGCTGGAAGCATGGGGAACAAATGGATTATATTGAGGTGGAAAACCTTGATTCGCTTATTTCTAAATGGTGTGATAAGTCTCAGGTAAAGTACTTGAGCCTTCGAGGGATAACAGGGATAGTGACCTTGTCAAAAAATATTTACGGCTTTGGAAAACTAAGGTTCTTGGATCTGAGGGCATGTAACAACTTGGAATCAATTCCAGAGGGGATTGAAGGGCTAAAACAACTTGTACATTTGGATTTGTCTGAATGTTATCTTCTTGATCAAGTTCCTAAAGGGATTGCTAAGTTATATAATCTTCAAGTGTTAAAGGGGTTTGTAATCAAACAAGATCCACCAAAAGTACAAACAATCAACAACAACAATAATACTAAAGATTTTGGAGATAATACTTCATGTACATTCAAGGATTTGTCCCAATTGAAGCTCTTGAGGAAACTTACAATTCGTACAAGAAGAATGAATTTTCCAACAAGTGATGATCTTCACACTTTATCCACAATGATTGACCTCAATAGTTTGGGAATTAAATGGGTGACAAGTTCTACTTCTAATACTCATACTAATTCTAATGCTCATGATCATACTCAGATAGTAACTATTGAAGAGGATGAAGATTCAGGAAGATTCCCCCCGAACCTCGAAAAGCTCGACCTCCAAGCCATGCCTGCAGAACAAGTGAAAAACCGAGTATTGGGGCGCATTCGAGAGACATCAATTAGCCTGAGAAAACTCTCCATAAGAGGAGGGGATATCAATGACCTTGGTCCAATGGAGTATTGTTTTGAGGGTGTTGAGTTTGTGCGTCTTAGATACTTGGAGAAACTATCAATGACTTGGAAAGACTTCATACACTCCTTCACTAACTTGACTCGCTTGGAGATGCACCGATGTCCTAAGCTCGAGAGCATGTCATTTCCATGTGATAATAATGGTGTCTTTCAAAGAGCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139516.p1 GENE.S_Transcript_139516~~S_Transcript_139516.p1 ORF type:complete len:603 (+),score=91.72,LRR_4|PF12799.3|6.1e+03,LRR_4|PF12799.3|8.9e-05,LRR_4|PF12799.3|7.2e+02,LRR_4|PF12799.3|2.4e+02,LRR_4|PF12799.3|25 S_Transcript_139516:82-1890(+)
MATPLHSLFQISLSLAQQLELLRDDKKRENIPGDQFLENIKECIKRLEQWDTDKDQVLIVESKKKVWEKLAETIQQEFIKYDKKNESEYHKLLESPCFKSLQQEPTKQQEDSSNINSDDDKFEDFEGKFNKLRDKEKECLYWFSLFPKKTDIKRKELIWWWEESELPILDFHNNEGEEILGKLYTKGFIKRDKSNKRIPVTYTLHENIWLDLKKKASKWCEYVCVLEKKDKTTKLLKPVVENGEKADITVGTGLYIMINISANKLDKDIEMPGGVFFRILLFGSWKHGEQMDYIEVENLDSLISKWCDKSQVKYLSLRGITGIVTLSKNIYGFGKLRFLDLRACNNLESIPEGIEGLKQLVHLDLSECYLLDQVPKGIAKLYNLQVLKGFVIKQDPPKVQTINNNNNTKDFGDNTSCTFKDLSQLKLLRKLTIRTRRMNFPTSDDLHTLSTMIDLNSLGIKWVTSSTSNTHTNSNAHDHTQIVTIEEDEDSGRFPPNLEKLDLQAMPAEQVKNRVLGRIRETSISLRKLSIRGGDINDLGPMEYCFEGVEFVRLRYLEKLSMTWKDFIHSFTNLTRLEMHRCPKLESMSFPCDNNGVFQRAP*

Click here to download the sequence:
Link to NCBI Protein BLAST