Transcript Information: S_Transcript_139519.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value5E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.93986435588927
Replicate 20.94320475803502
Replicate 30.41136214312864
Condition 2: 8 Hour
Replicate 10.51529753554411
Replicate 20.5821670649743
Replicate 31.1489955028707
Condition 3: 24 Hour
Replicate 10.48724647190916
Replicate 20.5897646135109
Replicate 30.93762246859168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139519.p1 GENE.S_Transcript_139519~~S_Transcript_139519.p1 ORF type:complete len:538 (+),score=79.51 S_Transcript_139519:82-1695(+)
ATGGCTACACCTCTTCATTCTCTCTTTCAAATCAGTTTATCACTAGCACAACAGCTAGAACTTCTACGAGATGACAAAAAGCGCGAAAATATTCCTGGTGATCAATTCTTGGAAAATATTAAAGAGTGCATAAAAAGATTGGAACAATGGGATACTGATAAAGATCAAGTTCTTATAGCTGAGTCCAAGAAGATGGTTTGGGCGAAACTAGCTGATACAATTCAAAAAGAGTTCATCAAGTATGACAAAAAAAACGAATCTGAATACCATAAATTGCTCGAATATCCTCCGTTTAATCCCCTTCAACAAGAACCAACAAAACAACAAGAAGATAGTTCTAATATCAATTCTGATGATGACAAATTCGAGGATTTTGAAGGTAAATTCAACAAACTTCGTGATAAAGAGAAAGAATGTTTATATTGGTTCTCTTTGTTTCCTAAGAAAACAGACATAAAAAGGAAAGAATTGATATGGTGGTGGGAAGGGAGTGATCAATTGCCAAAACATGAATATGATGAAATACTTGGTAAGCTTTATGCTAAGGGCTTTATTAAACGTGACAAAAGTAATAAAAGGATACCAGTCACGTACACATTGCATGAAGATATTTGGTTGGACGTAAAAGTGAAAGCAAGTGAAGCAAGTGAATGGTGTGATGAGTATGTGTGTGGGCGTGAAAATATTGACGTGGAAAGTCTTGATTTGCTTATTTCTAAATGGCCTAATAAGAATGAGTTAAAGTATTTAAGCCTTCGAGGGATAACAGGGACAGCGGAGTTGTCAAGAGAAATTTACGACCTTGTAAATCTAAGGTTCTTGGATGTGAGGGCATGGAACAACTTTGAAATAATTCCGGAGGGGATTGAAAGGCTAAGACAACTTGTACATTTGGATTTGTCCGAATGTTATCTTCTTGATCAACTACCAAAAGGGATTGCTATGTTATATAATCTTCATGTTTTGAAGGGGTTTGTGATCAAACAAGATCCACCAAAAGTACAAACAATCAACAACAACAATAATACTAAAGATTTTGGAGATAATACTTCATGTACATTCAAGGATTTGTCCCAATTGAAGCTCTTGAGGAAACTTACAATTCGTACAAGAAGAATGAATTTTCCAACAAGTGATGATCTTCACACTTTATCCACAATGATTGACCTCAATAGTTTGGGAATTAAATGGGTGACAAGTTCTACTTCTAATACTCATACTAATTCTAATGCTCATGATCATACTCAGATAGTAACTATTGAAGAGGATGAAGATTCAGGAAGATTCCCCCCGAACCTCGAAAAGCTCGACCTCCAAGCCATGCCTGCAGAACAAGTGAAAAACCGAGTATTGGGGCGCATTCGAGAGACATCAATTAGCCTGAGAAAACTCTCCATAAGAGGAGGGGATATCAATGACCTTGGTCCAATGGAGTATTGTTTTGAGGGTGTTGAGTTTGTGCGTCTTAGATACTTGGAGAAACTATCAATGACTTGGAAAGACTTCATACACTCCTTCACTAACTTGACTCGCTTGGAGATGCACCGATGTCCTAAGCTCGAGAGCATGTCATTTCCATGTGATAATAATGGTGTCTTTCAAAGAGCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139519.p1 GENE.S_Transcript_139519~~S_Transcript_139519.p1 ORF type:complete len:538 (+),score=79.51 S_Transcript_139519:82-1695(+)
MATPLHSLFQISLSLAQQLELLRDDKKRENIPGDQFLENIKECIKRLEQWDTDKDQVLIAESKKMVWAKLADTIQKEFIKYDKKNESEYHKLLEYPPFNPLQQEPTKQQEDSSNINSDDDKFEDFEGKFNKLRDKEKECLYWFSLFPKKTDIKRKELIWWWEGSDQLPKHEYDEILGKLYAKGFIKRDKSNKRIPVTYTLHEDIWLDVKVKASEASEWCDEYVCGRENIDVESLDLLISKWPNKNELKYLSLRGITGTAELSREIYDLVNLRFLDVRAWNNFEIIPEGIERLRQLVHLDLSECYLLDQLPKGIAMLYNLHVLKGFVIKQDPPKVQTINNNNNTKDFGDNTSCTFKDLSQLKLLRKLTIRTRRMNFPTSDDLHTLSTMIDLNSLGIKWVTSSTSNTHTNSNAHDHTQIVTIEEDEDSGRFPPNLEKLDLQAMPAEQVKNRVLGRIRETSISLRKLSIRGGDINDLGPMEYCFEGVEFVRLRYLEKLSMTWKDFIHSFTNLTRLEMHRCPKLESMSFPCDNNGVFQRAP*

Click here to download the sequence:
Link to NCBI Protein BLAST