Transcript Information: S_Transcript_139521.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35902868445437
Replicate 20.074410757360927
Replicate 30
Condition 2: 8 Hour
Replicate 10.35961872372906
Replicate 20.18863278785604
Replicate 30.35945780109581
Condition 3: 24 Hour
Replicate 10.036837914823936
Replicate 20.7261592242
Replicate 30.46786254377113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139521.p1 GENE.S_Transcript_139521~~S_Transcript_139521.p1 ORF type:complete len:593 (+),score=91.09,LRR_4|PF12799.3|0.42,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|7.7e+02,LRR_4|PF12799.3|23,LRR_4|PF12799.3|4.3 S_Transcript_139521:82-1860(+)
ATGGCTACACCTCTTCATTCTCTCTTTCAAATCAGTTTATCACTAGCACAACAGCTAGAACTTCTACGAGATGACAAAAAGCGCGAAAATATTCCTGGTGATCAATTCTTGGAAAATATTAAAGAGTGCATAAAAAGATTGGAACAATGGGATACTGATAAAGATCAAGTTCTTATAGCTGAGTCCAAGAAGATGGTTTGGGCGAAACTAGCTGATACAATTCAAAAAGAGTTCATCAAGTATGACAAAAAAAACGAATCTGAATACCATAAATTGCTCGAATATCCTCCGTTTAATCCCCTTCAACAAGAACCAACAAAACAACAAGAAGATAGTTCTAATATCAATTCTGATGATGACAAATTCGAGGATTTTGAAGGTAAATTCAACAAACTTCGTGATAAAGAGAAAGAATGTTTATATTGGTTCTCTTTGTTTCCTAAGAAAACAGACATAAAAAGGAAAGAATTGATATGGTGGTGGGAAGGGAGTGATCAATTGCCAAAACATGAATATGATGAAATACTTGGTAAGCTTTATGCTAAGGGCTTTATTAAACGTGACAAAAGTAATAAAAGGATACCAGTCACGTACACATTGCATGAAAATATTTGGTTGGACTTAAAAAAGAAAGCAAGTAAATGGTGTGAGTATGTGTGTGTGCTTGAAAAAAAGGACAAAACAACTAAATTATTGAAGCCAGTTGTTGAAAATGGGGAAAAAGCTGATATAACAGTTGGTACTGGGTTGTATATCATGATCAACATAAGTGCAAATAAACTTGATAAAGATATAGAAATGCCAGGTGGTGTTTTTTTTCGCATTCTATTATTTGGAAGCTGGAAGCATGGGGAACAAATGGATTATATTGAGGTGGAAAACCTTGATTCGCTTATTTCTAAATGGTGTGATAAGTCTCAGGTAAAGTACTTGAGCCTTCGAGGGATAACAGGGATAGTGAAGTTGTCAAAAAAAATTTACGAACTTGTAAATCTAAGGTTCTTGGATGTGAGGGCATGTAACAACTTGGAATCAATTCCAGAGGGGATTGAAGGGCTAAAACAACTTGTACATTTGGATTTGTCTGAATGTTATCTTCTTGATCAAGTTCCAAAAGGGATTTCTCAGTTATATAAACTTCAAGTTTTAAAGGGGTTTGTGATTAAACAAGATCCACCAAAAGTACACAAAATCAACAACAACAATAATACTAAAGATTTTGGAGATAATACTTCATGTACATTCAAGGATTTGTCCCAATTGAAGCTCTTGAGGAAACTTACAATTCGTACAAGAAGAATGAATTTTCCAACAAGTGATGATCTTCACACTTTATCCACAATGATTGACCTCAATAGTTTGGGAATTAAATGGGTGACAAGTTCTACTTCTAATACTAATGATCATACTATATCAATTAATGAAGATGAAGATGATGATGATTCAGGAAGATTTCCCCCGAACCTCGAAAAGCTCGACCTCCAAGCCATGCCTAAACAAGTGAAAAACCGAGTATTCGGGCGCATTCGAGAGACATCAATTAGCCTGAGAAAACTCTCCATAAGAGGAGGGGATATCAATGACCTTGGTCCAATGGAGTATTGTTTTGAGGGTGTTGAGTTTGTGCGTCTTAGATACTTGGAGGAACTATCAATGACTTGGAATGAGTTCATACACTCTTTCCCTAACTTGACTCGCTTGGAGATGCACCGATGTCCTAAGCTCGAGAGCATGTCATTTCCATGTGATAATAATGGTGTCTTTCAAAGAGCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139521.p1 GENE.S_Transcript_139521~~S_Transcript_139521.p1 ORF type:complete len:593 (+),score=91.09,LRR_4|PF12799.3|0.42,LRR_4|PF12799.3|0.00016,LRR_4|PF12799.3|7.7e+02,LRR_4|PF12799.3|23,LRR_4|PF12799.3|4.3 S_Transcript_139521:82-1860(+)
MATPLHSLFQISLSLAQQLELLRDDKKRENIPGDQFLENIKECIKRLEQWDTDKDQVLIAESKKMVWAKLADTIQKEFIKYDKKNESEYHKLLEYPPFNPLQQEPTKQQEDSSNINSDDDKFEDFEGKFNKLRDKEKECLYWFSLFPKKTDIKRKELIWWWEGSDQLPKHEYDEILGKLYAKGFIKRDKSNKRIPVTYTLHENIWLDLKKKASKWCEYVCVLEKKDKTTKLLKPVVENGEKADITVGTGLYIMINISANKLDKDIEMPGGVFFRILLFGSWKHGEQMDYIEVENLDSLISKWCDKSQVKYLSLRGITGIVKLSKKIYELVNLRFLDVRACNNLESIPEGIEGLKQLVHLDLSECYLLDQVPKGISQLYKLQVLKGFVIKQDPPKVHKINNNNNTKDFGDNTSCTFKDLSQLKLLRKLTIRTRRMNFPTSDDLHTLSTMIDLNSLGIKWVTSSTSNTNDHTISINEDEDDDDSGRFPPNLEKLDLQAMPKQVKNRVFGRIRETSISLRKLSIRGGDINDLGPMEYCFEGVEFVRLRYLEELSMTWNEFIHSFPNLTRLEMHRCPKLESMSFPCDNNGVFQRAP*

Click here to download the sequence:
Link to NCBI Protein BLAST