Transcript Information: S_Transcript_139779.p1


Annotated TAIR IDAT1G30760.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10918321-10920441 | Forward length=534
E-Value1E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9300242425377
Replicate 22.7247355885782
Replicate 31.3602704143994
Condition 2: 8 Hour
Replicate 14.6454966900101
Replicate 23.0315197985221
Replicate 33.8756086554511
Condition 3: 24 Hour
Replicate 13.7469783002734
Replicate 22.915584679633
Replicate 32.379438151426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139779.p1 GENE.S_Transcript_139779~~S_Transcript_139779.p1 ORF type:5prime_partial len:583 (+),score=86.48,FAD_binding_4|PF01565.19|2.3e-28,BBE|PF08031.8|1.2e-23 S_Transcript_139779:3-1751(+)
GCACTAAACATGGTTCATTCAAATAAAGTTCTAGTAATTTCATTCTTAATTTTCTCACTATGCTGTTCTGTATCATACTCAAACAAAACCCAAGCAAATTTCATGCAATGTTTATCAAAGAAAATCAGCCAACCAAACCCATTCCCCAAGTCATGTTTCACCCCAAGCAACACTTCTTTCACAACCATCCTCAACTCAACAGCAAACAACTTAAGATGTTTATTACCTTCAGTAGCAAAGCCACAAGTAATTTACATGCCATTAGATGAATCCCATGTCCAAGCAGCTGTTGTATGTGCTAAAGAGTTTGGGATTCAACTGAGGGTCCGAAGTGGGGGCCACGACTACGAGGGGGTGTCCTACTCCTCTGAGATGGGGGACCCATTTGTAGTCCTCGACATGTCAAAGCTCCGGTCAGTCATCGTCGATATCGATGACAATAGTGCTTGGGTTGAGGCAGGGGCCACTACAGGGGAGTTGTATTACAGGATCTCACAGCAGAGTAAAACTCACGGTTTTCCTGCAGGGTTGTGTAACAGTTTGGGTATTGGAGGACATATCACTGGTGGCGCCTATGGTTCTATGATGAGAAAATATGGCCTAGGGGTCGACAATGTGATCGATGTTCGAATGGTGGGGCCCGATGGTAAGGTCATCGATCGAGAGTCGATGGGGGAGGATCTGTTTTGGGCTGTCAGAGGTGGCGGTGGTGGTAGCTTTGGTGCTATTCTTGCTTGGAAGGTGAAATTAGTACCTGTTCCTGAAACTGTCACTACTTTCACAGTAGTTAAAACTTCTTCTGATCGAGGCTTCACGAAGCTGTTATATAGATGGCAACAAGTTGCTGACAAACTTGATGAGAAACTCTTCATTAGAGTGGAAATCATGCCAGCAACACCAGCCCCAAATTCGACTGATCAACCCAAATCATTACAAGCCTTGTTTAATGCGCTTTTCCTAGGAAGCGCGAACCAACTGATGCAAGTCATGGGTCAGAGCTTCCCTGAACTCGGGTTGAGCCCTAAGGACTGCAATGAAATGAGCTGGATTGAGTCTGTTGTTTACATTGCAGGCTTCGATCCAGGGACTAAACCTGAAGTTTTACTCCAAGGGAAGCCTGTGTTCCGGAACTACTTCAAGGCAAAGTCTGATTTTGTCAGAGAGCCTGTCCCAGAAAGAGCCCTTGATGGGCTGTGGAACAAGTTGTTGGAAGCTGAAAGTTTCATCATGATATGGAACCCTTATGGTGGGATGATGAGCCAGATACCGGAGTCTCAAACACCGTTCCCTCATAGGAACGGAACCATCTACAAGATCCAATATGCTGCGACATGGCAAGATGGAGAAGCTAGTGAAAGCAAGAACATGGCTTGGATTAGAGACCTCTATGATTATATGGAGCCTTATGTGTCTAAGAATCCTAGGGAGGCCTATGTCAATTATAGGGATCTCGATTTGGGGATGAACAAGGATGGTAATTTCAGTGTGGAAGCAGCTAAGTCTTGGGGACTTAGTTATTTCAAGGACAATTTCGAGAGGTTGGTCCAAATTAAGACCAAATTTGATCCCGAAAATGTCTTTAGGCACGAGCAGAGCATACCACCCCTTACATCACCAGGGAGGAAGATGAAGAAGACAGAAAGGTTTCACTACCATAAGTATCGAAAGGTGCAACATAAGCAACACCACCATAAGCAAGGAAAGGAGCATCATCCGAAGAATCATGGACATGGAGAGTTCATATATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139779.p1 GENE.S_Transcript_139779~~S_Transcript_139779.p1 ORF type:5prime_partial len:583 (+),score=86.48,FAD_binding_4|PF01565.19|2.3e-28,BBE|PF08031.8|1.2e-23 S_Transcript_139779:3-1751(+)
ALNMVHSNKVLVISFLIFSLCCSVSYSNKTQANFMQCLSKKISQPNPFPKSCFTPSNTSFTTILNSTANNLRCLLPSVAKPQVIYMPLDESHVQAAVVCAKEFGIQLRVRSGGHDYEGVSYSSEMGDPFVVLDMSKLRSVIVDIDDNSAWVEAGATTGELYYRISQQSKTHGFPAGLCNSLGIGGHITGGAYGSMMRKYGLGVDNVIDVRMVGPDGKVIDRESMGEDLFWAVRGGGGGSFGAILAWKVKLVPVPETVTTFTVVKTSSDRGFTKLLYRWQQVADKLDEKLFIRVEIMPATPAPNSTDQPKSLQALFNALFLGSANQLMQVMGQSFPELGLSPKDCNEMSWIESVVYIAGFDPGTKPEVLLQGKPVFRNYFKAKSDFVREPVPERALDGLWNKLLEAESFIMIWNPYGGMMSQIPESQTPFPHRNGTIYKIQYAATWQDGEASESKNMAWIRDLYDYMEPYVSKNPREAYVNYRDLDLGMNKDGNFSVEAAKSWGLSYFKDNFERLVQIKTKFDPENVFRHEQSIPPLTSPGRKMKKTERFHYHKYRKVQHKQHHHKQGKEHHPKNHGHGEFIY*

Click here to download the sequence:
Link to NCBI Protein BLAST