Transcript Information: S_Transcript_139788.p1


Annotated TAIR IDAT4G23650.1
Annotated Gene Namecalcium-dependent protein kinase 6
Annotated Gene Symbol(s)CDPK6, CPK3
Annotation TypeOrtholog
Chromosome Positionchr4:12324967-12327415 | Reverse length=529
E-Value9.8E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4858297857037
Replicate 23.5154994349886
Replicate 33.546680016077
Condition 2: 8 Hour
Replicate 12.3434494853992
Replicate 23.9335118487431
Replicate 33.5136012535683
Condition 3: 24 Hour
Replicate 12.1604829825862
Replicate 22.8641080563516
Replicate 32.4944879081983


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139788.p1 GENE.S_Transcript_139788~~S_Transcript_139788.p1 ORF type:5prime_partial len:182 (-),score=44.91,Pkinase|PF00069.21|4.3e-10,Pkinase|PF00069.21|54,EF-hand_1|PF00036.28|1.4e-08,EF-hand_1|PF00036.28|7.1e+02,EF-hand_6|PF13405.2|7e-07,EF-hand_6|PF13405.2|1.8e+03,EF-hand_7|PF13499.2|1.7e-06,EF-hand_5|PF13202.2|4.3e-06,EF-hand_8|PF13833.2|8.9e-05,EF-hand_8|PF13833.2|1.2 S_Transcript_139788:18-563(-)
CTTAGTGGTGTTCCACCATTCTGGGGAGAGAATGAGCAGGGTATTTTTGATTCTATTGTACGGGGAGACCTTGATTTCTCATCTGAACCATGGCCCTCAATTTCCCGCAGCGCTAAAGATCTTGTGAAGAAGATGTTACGACAGGATCCCAAGGAAAGGCTTTCTGCTCTTGATGCTTTAAATCATCCATGGATGAGAGAAGATGGAGTTGCTTCTGATAAGCCAATTGATATTGCTGTTTTGACTAGAATGAAGCAGTTCAGGGCAATGAACAAACTGAAAAAAGTCGCTCTGAGGGTAATTGCAGAGAACCTCTCTGAAGAAGAAATTATGGGTCTCAAGGAAATGTTCAAATCTATGGATACAGACAACAGTGGGACCATTACTTTTGAAGAGTTAAAGGCTGGTCTCCCAAAACTGGGAACTAAGCTTTCTGAGAGTGAAGTGAGGCAATACATGGAAGCGGTTTGCCCTTTTAATTCTATTGTTTTTCCCATGTTTTTAAGAGTATTTTCTCAACATGTTTGTCCAACTATATCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139788.p1 GENE.S_Transcript_139788~~S_Transcript_139788.p1 ORF type:5prime_partial len:182 (-),score=44.91,Pkinase|PF00069.21|4.3e-10,Pkinase|PF00069.21|54,EF-hand_1|PF00036.28|1.4e-08,EF-hand_1|PF00036.28|7.1e+02,EF-hand_6|PF13405.2|7e-07,EF-hand_6|PF13405.2|1.8e+03,EF-hand_7|PF13499.2|1.7e-06,EF-hand_5|PF13202.2|4.3e-06,EF-hand_8|PF13833.2|8.9e-05,EF-hand_8|PF13833.2|1.2 S_Transcript_139788:18-563(-)
LSGVPPFWGENEQGIFDSIVRGDLDFSSEPWPSISRSAKDLVKKMLRQDPKERLSALDALNHPWMREDGVASDKPIDIAVLTRMKQFRAMNKLKKVALRVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQYMEAVCPFNSIVFPMFLRVFSQHVCPTISV*

Click here to download the sequence:
Link to NCBI Protein BLAST