Transcript Information: S_Transcript_13985.p1


Annotated TAIR IDAT5G49280.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19976842-19977330 | Reverse length=162
E-Value1.2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0055887743106
Replicate 24.8811481321935
Replicate 33.3458061036621
Condition 2: 8 Hour
Replicate 15.6616080487964
Replicate 24.9495240353377
Replicate 36.5079357732023
Condition 3: 24 Hour
Replicate 12.6097869656904
Replicate 24.8135529011711
Replicate 34.5756806221671


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13985.p1 GENE.S_Transcript_13985~~S_Transcript_13985.p1 ORF type:5prime_partial len:226 (+),score=27.40 S_Transcript_13985:1-678(+)
CAAAAGAGATGCTCAAAACTGCCCTTAAAAAGGACCCTTCCACTCAGTTTACACTCCTCTGATCTTTCAATCACTCCCACCACTCCACTCATATTTTTCTCTCTCTTTCACTTAGCAATGGAGAAACACAAAAGAAGATTACAACAACTTACAATCTCTCTCCTCGTCACACTCTCTCTCTTCCTAAAACCGGCAACTGCCAACTTCCGGTCAGTAGCCAACCACGAGATAGCCTGCACAATGTGCGAAACCTGCCAACCTTGCAACCCTCAACCGGTCGCCTCCCCACCCCCACCTCCTCCCTCTCCACAACCCCCTTCTCCCTCCTCCTCTGGCGGCGGCTGCCCTCCTCCACCCTCCTCCAGCGGTGGCAGCAGCAGCGGCGGCGGCGGGAGCTACTACTACTCTCCCCCGCCACCATCTCAGCCCACCGTGTACCCACCACCATCAGAGGGCGGCGGAAGTGGCGGGTACGGAGGCGGCGTGTACTATTACCCGCCACCGTACCATTACGGGCCGGCCCCACCGCCTCCCAACCCCATTGTCCCTTACTTCCCTTTCTACTACCACAGCCCCCCTCCCCCTTCTAATTCTGGCTCATCCAAAATCATTGTGAAATCCTCCATTTTTTCCTCCACTTTATTGCCACTTGTTCTGTTCTTCTTTTTCTTCCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13985.p1 GENE.S_Transcript_13985~~S_Transcript_13985.p1 ORF type:5prime_partial len:226 (+),score=27.40 S_Transcript_13985:1-678(+)
QKRCSKLPLKRTLPLSLHSSDLSITPTTPLIFFSLFHLAMEKHKRRLQQLTISLLVTLSLFLKPATANFRSVANHEIACTMCETCQPCNPQPVASPPPPPPSPQPPSPSSSGGGCPPPPSSSGGSSSGGGGSYYYSPPPPSQPTVYPPPSEGGGSGGYGGGVYYYPPPYHYGPAPPPPNPIVPYFPFYYHSPPPPSNSGSSKIIVKSSIFSSTLLPLVLFFFFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST