Transcript Information: S_Transcript_139902.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17169678216245
Replicate 20.14234057779042
Replicate 30.23797078817549
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.55008638980597
Condition 3: 24 Hour
Replicate 10.14093473219738
Replicate 20
Replicate 30.16272286712978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139902.p1 GENE.S_Transcript_139902~~S_Transcript_139902.p1 ORF type:internal len:155 (+),score=20.27,RVT_1|PF00078.23|5.1e-08 S_Transcript_139902:1-462(+)
CCCTTGTCCCCTTTCCTGTTTACTTTGGTGGTAGACGTGCTTAGTAGGTTGTTTGATAGGGCGGTGGATAGAGGAGTGTTGGAAGGTTTTGATGTAGGGAGAGAGGTTCTGTGGGTCTCACACTTGTTGTTTGCAGATGATGCTATTCTGTTTCTGGGTAAGGATTTGGTGAGCTTTGGGCATGTACTTACTATCTTGCAAGTGTTTGAGGCTATCTCGGGAATGCGGTTCAACCTTGGCAAATGTAGTTTGGCGGGGGTCAACATGGACTCAGAGGCTCTGAATTCTTATGCTCTGTTGGCTGGCTGTCAGGTCCATAGCTGGCCGATGGTCTATCTTGGCGTCCCTCTTGGGGGCAACCCACGATCGGTCTCTTTTTGGGATCCAGTGGTTCAACGAGTGGTTGGTCGGTTGGAGGGCTGGAAGGGGGCTTATTTCTCTTTTGGTGGACGGATTACTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139902.p1 GENE.S_Transcript_139902~~S_Transcript_139902.p1 ORF type:internal len:155 (+),score=20.27,RVT_1|PF00078.23|5.1e-08 S_Transcript_139902:1-462(+)
PLSPFLFTLVVDVLSRLFDRAVDRGVLEGFDVGREVLWVSHLLFADDAILFLGKDLVSFGHVLTILQVFEAISGMRFNLGKCSLAGVNMDSEALNSYALLAGCQVHSWPMVYLGVPLGGNPRSVSFWDPVVQRVVGRLEGWKGAYFSFGGRITL

Click here to download the sequence:
Link to NCBI Protein BLAST