Transcript Information: S_Transcript_139975.p1


Annotated TAIR IDAT1G64140.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23804069-23806009 | Reverse length=646
E-Value4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1804539144615
Replicate 29.7486744556461
Replicate 310.865487925222
Condition 2: 8 Hour
Replicate 15.9512717164092
Replicate 25.0293303143571
Replicate 35.4528912477859
Condition 3: 24 Hour
Replicate 19.4830501974672
Replicate 29.8385538626004
Replicate 310.558065099816


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_139975.p1 GENE.S_Transcript_139975~~S_Transcript_139975.p1 ORF type:3prime_partial len:258 (-),score=49.62 S_Transcript_139975:3-773(-)
ATGGGCACTAGGGTTCCAGGTTTGGGCTTTCATTCTAACAATCTATCAAATGCATTCAAGGGTCTGGGAGAGTCGTTTCAAGTTCAATGTTCTGGATCTGATTACTGTGCAGATACCATCCTACAGCTGCATCCTGTTGGATCTACTGTCCCTCACTTCCCTCTGTCAAGAGGAGTGAAGCGTAAGTGGGGTTGGGGTGATGGAAACATGAGCCTGCATGTTGACCCTTCATTGTGTCTTGGACTGGGTCGTTCATCTAGTTCATCAGACAGCAAAGGTAGCTCAGCAACTGGCTGTACTGCCATTTCTTCAGCCAAAGAAACTGAGGCAGAATCCTCAATGGATCTTGATTTAGACTTTTCTCTCCACCTTGGTAGTGATAAGTCAACTAGCCCAAAGAAACCTGCAGTTTTATGTTATAAGGGAGTAGATCCACAGAAGAAGCTTGATTTGGAGCTCAGCCTTTCTACTGGGCCTTCTGAATCAGACATCACCAGCATCCATGAAGGTTTATATGGCGTTCAAAATCTAGAGCCTCCCTTGGCTGTTGAGGTAACAAATTTTGTGGATAATGAATCGGCGTCATCCCACTGGCAAACAGAAATTTCTTCATTTCATGTGTTAGCAACTCCAGGAGCAGGAAGAAGTTTTCTTCCGAAGCAGATTCCTACGAAAGCTGATATTCCCTCTATCACTCCAGATATCTCGACAAGCATAGCAAGTGTTCCTAAAAGCTCAGTCACCTGTACTTCCGGAATTACTCAGCGGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_139975.p1 GENE.S_Transcript_139975~~S_Transcript_139975.p1 ORF type:3prime_partial len:258 (-),score=49.62 S_Transcript_139975:3-773(-)
MGTRVPGLGFHSNNLSNAFKGLGESFQVQCSGSDYCADTILQLHPVGSTVPHFPLSRGVKRKWGWGDGNMSLHVDPSLCLGLGRSSSSSDSKGSSATGCTAISSAKETEAESSMDLDLDFSLHLGSDKSTSPKKPAVLCYKGVDPQKKLDLELSLSTGPSESDITSIHEGLYGVQNLEPPLAVEVTNFVDNESASSHWQTEISSFHVLATPGAGRSFLPKQIPTKADIPSITPDISTSIASVPKSSVTCTSGITQRP

Click here to download the sequence:
Link to NCBI Protein BLAST