Transcript Information: S_Transcript_140055.p1


Annotated TAIR IDAT4G28830.1
Annotated Gene NameS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14232490-14233917 | Forward length=208
E-Value6.6E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.332106361894
Replicate 29.690323256634
Replicate 310.197748187403
Condition 2: 8 Hour
Replicate 19.9518488146621
Replicate 29.9137995932906
Replicate 37.7740150088756
Condition 3: 24 Hour
Replicate 19.508949284141
Replicate 27.732359243695
Replicate 38.2095281789201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140055.p1 GENE.S_Transcript_140055~~S_Transcript_140055.p1 ORF type:5prime_partial len:255 (+),score=59.32,MTS|PF05175.10|4.4e-14,PrmA|PF06325.9|4.3e+03,PrmA|PF06325.9|2.6e-11,Methyltransf_31|PF13847.2|7.2e-10,Methyltransf_18|PF12847.3|4e-09,Methyltransf_26|PF13659.2|3.7e-08,Methyltransf_25|PF13649.2|3.5e-07,UPF0020|PF01170.14|9.5e-06,UPF0020|PF01170.14|1.8e+03,Methyltransf_11|PF08241.8|6e-06 S_Transcript_140055:3-767(+)
GCACACAGACACAGGAGAGGGTGGCGAGGCGGCTACTATATAAGTCGCCTGTTTTTCATTGCTTGGTCACCCTGCTTCACCCTTTGCATTGTGGGAAACCAAACACCACCACCAACAACAAGAATGAAACTCAAGCAATTAGAGGGTCTTCTTGGTAATCTCGATCAGTTCACCTCTCCAAAGATTGAACTTGAACAGTACCCAACAGGCCCCCATATTGCTTCTCGAATGTTATACACTGCAGAGACTTCTTTTGGAGATGTGTGTGAGAAGGTTGTGGCTGATTTGGGTTGTGGGTGTGGCACTTTAGGCCTTGCTGCTTCCCTTTTGGGTGCTGATCATGTTGTAGGTTTTGATGTGGATTCTGAGGCCCTTGAAATTGCGTCATCAAATGCAGAAGATTTAGAGTTGGATGTAAACTTGGTCAAATGTGACATTCGGAACTTGGGATGTAGAGGAAAAATCATTGATACAGTTGTGATGAATCCACCTTTTGGAACCCGCAAGAAGGGGGCTGACATGGATTTCCTATCTGTAGCATTAAAGATTGCTTCTGGAGCAGTATATTCTTTGCATAAGACCTCAACGAGGGAACATGTAAGCAGGACAGCATTGCGAGACTACAATGCCAAGAGTGCAGAGGTTCTATGTGAGCTCCGATATGATGTCCCACAACTTTACAAGTTTCACAAGAAAAAGGAAGTTGACATCGCTGTGGACCTCTGGCGATTTGTTCCTCCAGCAGCCTCTTCCAGTGGCGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140055.p1 GENE.S_Transcript_140055~~S_Transcript_140055.p1 ORF type:5prime_partial len:255 (+),score=59.32,MTS|PF05175.10|4.4e-14,PrmA|PF06325.9|4.3e+03,PrmA|PF06325.9|2.6e-11,Methyltransf_31|PF13847.2|7.2e-10,Methyltransf_18|PF12847.3|4e-09,Methyltransf_26|PF13659.2|3.7e-08,Methyltransf_25|PF13649.2|3.5e-07,UPF0020|PF01170.14|9.5e-06,UPF0020|PF01170.14|1.8e+03,Methyltransf_11|PF08241.8|6e-06 S_Transcript_140055:3-767(+)
AHRHRRGWRGGYYISRLFFIAWSPCFTLCIVGNQTPPPTTRMKLKQLEGLLGNLDQFTSPKIELEQYPTGPHIASRMLYTAETSFGDVCEKVVADLGCGCGTLGLAASLLGADHVVGFDVDSEALEIASSNAEDLELDVNLVKCDIRNLGCRGKIIDTVVMNPPFGTRKKGADMDFLSVALKIASGAVYSLHKTSTREHVSRTALRDYNAKSAEVLCELRYDVPQLYKFHKKKEVDIAVDLWRFVPPAASSSGA*

Click here to download the sequence:
Link to NCBI Protein BLAST