Transcript Information: S_Transcript_140147.p1


Annotated TAIR IDAT1G55020.1
Annotated Gene Namelipoxygenase 1
Annotated Gene Symbol(s)LOX1, ATLOX1
Annotation TypeOrtholog
Chromosome Positionchr1:20525798-20530143 | Forward length=859
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3982646461936
Replicate 22.1806245492892
Replicate 32.010472683532
Condition 2: 8 Hour
Replicate 12.2317268936535
Replicate 21.7559299804437
Replicate 31.2392934654059
Condition 3: 24 Hour
Replicate 12.0320821851716
Replicate 21.9106120224246
Replicate 31.0631384996342


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140147.p1 GENE.S_Transcript_140147~~S_Transcript_140147.p1 ORF type:complete len:688 (+),score=123.71,Lipoxygenase|PF00305.15|0 S_Transcript_140147:521-2584(+)
ATGTATCGCGAAGAAGAGCTTAAAATTCTAAGAGGAAATGGAGAAGGAAAGCTTGAGGAATGGGATCGTGTATATGACTATGCATTCTACAATGATCTAGGAGATCCAGATAAAGGTCCTAAGTACGTCCGCCCAGTGCTTGGAGGATCTGCTGAATATCCATATCCTCGCAGAGGAAGGACAGGCCGTGCACCAACAAAAACAGATCCTAACACTGAGAGTAGGCTACCACTTATAAAGGGCTTAGACGTGTACGTTCCAAGAGATGAGAGATTCGGGCACTTGAAGTTGTCAGATTTCCTCGCCTATGCGCTCAAGTCCTTGTCTCAGGACTTGGTTGCTGGGCTTGAGTCTGTATTTGATAAGACCCCGAATGAGTTTGACAGTTTTCAAGATGAACTGGATCTGTACAAAGGAGGAATCAAGCTGCCAGACAGTCCTCTGATCGAAATGATAAAGGACAACATTCCATTTGAATTCCTAAAAGCATTGCTTCAAACTGATGGTGCACCCCTTCTGAAGTTCCCAATGCCACAATTAATCAAAGAGGAAAAGTCAGCATGGAGTACTGATGAAGAATTTGCAAGGGAAATGCTAGCTGGGGTGAATCCTCTTGTCATTAGCCGCCTTGAGGAATTTCCTCCAATCAGCAAACTAGATCCTAAAACATATGGAAACCAAGACAGCTCAATCACCAAACAACACGTTGAGCAAAACCTTGATGGAAAGGGCATAGACGAGGCAATAAACAACAACAAGGTTTTCATATTAGATCATCATGACACGTTGATGCCATATCTAAGGAAAATAAACTCAACTTCTTCAAAAGTATATGCAACCAGGACAGTCCTCTTTCTAAAAGATGATGGAACCTTGAAGCCATTGGCTATCGAGTTGAGCCTGCCACATCCAGATGGAGATCAGTTTGGTGCCATTAGCAAGGTTTTTACACCAGCTCGTGATGGGATTGAGGGCTCCATTTGGCAACTAGCCAAAGCTTATGTTGCAGTTAATGATTCTGGTTACCATCAACTTGTCAGCCATTGGTCACGTACACATGCTGCGATGGAACCATTTGTAATAGCAACAAATAGGCAGCTGAGTGTGCTTCATCCAATTTACAAACTCTTGCAACCTCATTTTCGTGATACTATGGATATAAACGCCTTAGCACGACAGATCCTTCTCAATGCAGAAGGATTGCTCGAGAAGACTGTGTTTCCAGGAAAGTATGCCATGGAATGGTCATCTGCAACATACAAGGACTGGGTTTTTACTGAGCAAGCAGTTCCTAGAGATCTTATTAAGAGGGGAATGGCTGTGAAGGACTTAGAAAGCCCAAGTGGCTACCGACTGCTCATAGAAGACTATCCATACGCAGTCGATGGGCTAGAGATATGGTCAGCAATTGAGGTCTGGGTCAAAGATTATTGCTCATTTTACTACAAGTCTGATGACATGATTGCTAATGACACGGAACTACAATCTTGGTGGAAAGAAATCCGCGAAGAAGGCCATGGGGACAAGAAAGACGAGAAATGGTGGCCAGAAATGAAGACGATTGATGAACTGACAGAAACTTGCACAACCATTATATGGGTAGCTTCAGCACTCCATGCAGCAGTCAACTTTGGGCAGTACCCGTATGCAGGCTACCATCCCAACCGACCAACCATAAGCCGTAGGTTCATGCCAGAGCCGAACACCCCTGAATACGAAGAGCTCAAGACTCAACCAGACAAAGTCTTCCTAAAGACAATCTCGAGCAAGTTGCAGACCTTGCTTGGAATTTCACTCATAGAGCTTTTGTCTAGGCATCCTTCTGATGAGGTCTATCTTGGACAGAGAGACACACATGACTGGACTTCAGACAATGAACCATTACAAGCATTCGACAGATTCAGTAAGAAGCTGGTTGGAATCGAATATAAGATTATTGAAAGGAACAGCAATGGAAGGTGGAAGAACAGGGTTGGACCAGCAAAGCTGCCATACACACTGCTCTATCCTTCAAGTGAGGCAGGGCTCACTGGCAGGGGAATTCCCAACAGCATATCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140147.p1 GENE.S_Transcript_140147~~S_Transcript_140147.p1 ORF type:complete len:688 (+),score=123.71,Lipoxygenase|PF00305.15|0 S_Transcript_140147:521-2584(+)
MYREEELKILRGNGEGKLEEWDRVYDYAFYNDLGDPDKGPKYVRPVLGGSAEYPYPRRGRTGRAPTKTDPNTESRLPLIKGLDVYVPRDERFGHLKLSDFLAYALKSLSQDLVAGLESVFDKTPNEFDSFQDELDLYKGGIKLPDSPLIEMIKDNIPFEFLKALLQTDGAPLLKFPMPQLIKEEKSAWSTDEEFAREMLAGVNPLVISRLEEFPPISKLDPKTYGNQDSSITKQHVEQNLDGKGIDEAINNNKVFILDHHDTLMPYLRKINSTSSKVYATRTVLFLKDDGTLKPLAIELSLPHPDGDQFGAISKVFTPARDGIEGSIWQLAKAYVAVNDSGYHQLVSHWSRTHAAMEPFVIATNRQLSVLHPIYKLLQPHFRDTMDINALARQILLNAEGLLEKTVFPGKYAMEWSSATYKDWVFTEQAVPRDLIKRGMAVKDLESPSGYRLLIEDYPYAVDGLEIWSAIEVWVKDYCSFYYKSDDMIANDTELQSWWKEIREEGHGDKKDEKWWPEMKTIDELTETCTTIIWVASALHAAVNFGQYPYAGYHPNRPTISRRFMPEPNTPEYEELKTQPDKVFLKTISSKLQTLLGISLIELLSRHPSDEVYLGQRDTHDWTSDNEPLQAFDRFSKKLVGIEYKIIERNSNGRWKNRVGPAKLPYTLLYPSSEAGLTGRGIPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST