Transcript Information: S_Transcript_140166.p6


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21813935438672
Replicate 20
Replicate 30.4535099036951
Condition 2: 8 Hour
Replicate 10.17479828128798
Replicate 20.3667516170447
Replicate 30.34944012467183
Condition 3: 24 Hour
Replicate 10.53716926616215
Replicate 20.55730684204133
Replicate 30.41347613778879


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140166.p6 GENE.S_Transcript_140166~~S_Transcript_140166.p6 ORF type:complete len:122 (+),score=11.71,RVT_1|PF00078.23|1.2e-19 S_Transcript_140166:3160-3525(+)
ATGTGTCATGAGTTAGTAAAAGGTTACACCAAAAAACATATCTCCCCTAGGAGTATGATTAAAGTAGACCTCCAAAAGACCTATGATAGTATGGAATGGCCTTTTATTTACCAAATACTTGTGGAACTGGGATTTCCTGCTCAGTTCATTGCTTGGGTGATGCAATGTCTTACTACTGTGTCCTATTCTATTTTAATTAATGGTGAACTAACTCCTCATTTTGAAGCAAAGAAAGGACTTAGGCAAGGGGATCCACTTTCTCCCTATCTATTTGTGATGGCTATGGAATATCTCAGTAGATGCTTAAAAGAGGTGACTGGTAACCTTGATTTAATTTTCATCCAAAATATGCTCGACAAGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140166.p6 GENE.S_Transcript_140166~~S_Transcript_140166.p6 ORF type:complete len:122 (+),score=11.71,RVT_1|PF00078.23|1.2e-19 S_Transcript_140166:3160-3525(+)
MCHELVKGYTKKHISPRSMIKVDLQKTYDSMEWPFIYQILVELGFPAQFIAWVMQCLTTVSYSILINGELTPHFEAKKGLRQGDPLSPYLFVMAMEYLSRCLKEVTGNLDLIFIQNMLDKG*

Click here to download the sequence:
Link to NCBI Protein BLAST