Transcript Information: S_Transcript_140168.p3


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value9E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65441806316018
Replicate 20.18084253735668
Replicate 30.15116996789837
Condition 2: 8 Hour
Replicate 10.17479828128798
Replicate 20.91687904261175
Replicate 30.69888024934365
Condition 3: 24 Hour
Replicate 10.89528211027025
Replicate 20.37153789469422
Replicate 30.20673806889439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140168.p3 GENE.S_Transcript_140168~~S_Transcript_140168.p3 ORF type:complete len:122 (+),score=22.37,zf-RVT|PF13966.2|4.6e-09,zf-RVT|PF13966.2|5.8e+03 S_Transcript_140168:4193-4558(+)
ATGATTCAGAAGCTGATGACAAAAGAAAGAATACAGAAATGGGACCTGAACTGCGACAGGACCTGCTTGCTGTGCCGTAGGGATGAAGAGACTTGTGAGCACCTTCTGGTCCATTGTAGCTTTACCCAGCAAGTGATTAGTATTCTGATGAGTTATCTGAAAATCAATTGGAAACCTGCTGGAACATGGGAGTTAACTGTGGATGGGTGGCTTAAACTCTGCAAGGGGAAATCCCAGCAAGCACAATGCACCAAGACCATACTTGCTGAAGCTAGTTATGCTGTGTGGTGGGAGAGGAACCAGAGGTATTTTGGGCAACAAGAAAAGAGAGCTGAGCACGTGGCACAAAGTGTTTTATATATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140168.p3 GENE.S_Transcript_140168~~S_Transcript_140168.p3 ORF type:complete len:122 (+),score=22.37,zf-RVT|PF13966.2|4.6e-09,zf-RVT|PF13966.2|5.8e+03 S_Transcript_140168:4193-4558(+)
MIQKLMTKERIQKWDLNCDRTCLLCRRDEETCEHLLVHCSFTQQVISILMSYLKINWKPAGTWELTVDGWLKLCKGKSQQAQCTKTILAEASYAVWWERNQRYFGQQEKRAEHVAQSVLYI*

Click here to download the sequence:
Link to NCBI Protein BLAST