Transcript Information: S_Transcript_140169.p4


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.14873174260968
Condition 2: 8 Hour
Replicate 10.68791581668171
Replicate 20
Replicate 30.17190199681437
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.40680716782445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140169.p4 GENE.S_Transcript_140169~~S_Transcript_140169.p4 ORF type:complete len:124 (+),score=14.18,zf-RVT|PF13966.2|1.3e-15,zf-RVT|PF13966.2|1e+04 S_Transcript_140169:4283-4654(+)
ATGCTGACTATGGATATTCCAAAGGTGAGGTGGTATAACTTGGTATGGACCAATTTTGTGAGACCAAGAGCAAAATTTATATCTTGGTTGTTACTGTTACAAAAGCTGATGACAAAGGATAGAATACAGAAATGGGAGCCTAATTGTGACACAGGGTGCTTACTTTGCAAGAGGGGGGAGGAAACATGTGAACATCTTCTTGTCCACTGCAACTTTAGCCAAAAAGTTCTAAGGATTCTGCTGAATTTCTTGAATGTTTCTTGGACTCCAGTTGGAACCTGGGAGTTAACAATTGAAAGGTGGCTGCTGCTAAGCAAAGGGAAGTCTCAGAAAGCGCAGTGTGTTAGAGCCATCTTCACAGAAGCGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140169.p4 GENE.S_Transcript_140169~~S_Transcript_140169.p4 ORF type:complete len:124 (+),score=14.18,zf-RVT|PF13966.2|1.3e-15,zf-RVT|PF13966.2|1e+04 S_Transcript_140169:4283-4654(+)
MLTMDIPKVRWYNLVWTNFVRPRAKFISWLLLLQKLMTKDRIQKWEPNCDTGCLLCKRGEETCEHLLVHCNFSQKVLRILLNFLNVSWTPVGTWELTIERWLLLSKGKSQKAQCVRAIFTEAC*

Click here to download the sequence:
Link to NCBI Protein BLAST