Transcript Information: S_Transcript_140170.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value6E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3877945429389
Replicate 20.609095417232
Replicate 30.56572810072394
Condition 2: 8 Hour
Replicate 11.4391367698679
Replicate 21.3038807489411
Replicate 30.98079053397153
Condition 3: 24 Hour
Replicate 10.33504422531586
Replicate 20.48664626084182
Replicate 31.779469390545


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140170.p2 GENE.S_Transcript_140170~~S_Transcript_140170.p2 ORF type:complete len:326 (+),score=50.28,RVT_1|PF00078.23|1.5e-05 S_Transcript_140170:3453-4430(+)
ATGGAATATTTGAGTAAATGTCTCAAAGAAATTTGTGATGATCCAAACTTCAATTTTCATCCTAAATGTGGGAGACAAGGTCTAACCCACTTGATATTTGCTGATGATCTCATGCTATTTGCTCGGGGTGATATCATCTCTGTCAAGCTGATGCAGGGAGCTTTTGGTAAATTTTCTAAAGCTTTGGGTCTTCATGCTAATATGGACAAAAGCACCTTCTTCTGTGGTGGACTAATGGAGCAGGATAAGAATAAAATTCTAGAGATGCTGAATATGAAGGAGGGTTGTATGCTGGTTAGATACTTGGGACTCCCTCTCTCTCATAAAAAACTCTCAGTGGTGCAATGTATGGTGATAGTGGATAAAGTGACTGCAAGAATTTCTTCTTGGACAACGAGATTCCTTTCTTATGCTAGGAGGGTACAGCTGGTACAGTCTTTCATTTTTGGTATTCATGCCTTCTGGGCACAAATTATGTTAATTCCTAAGAAGGTGCTAAAAATGGTGGAAGCAATGTGTTGGAGTTTTATATGGACAGGCAAGGCATCCATTTCCAGAAAAGCCTTAGTAGCTTGGGATAAAGTCACGATTCCAAAGAAAAATGGGGGCTTGGGGCTGATGAACTTGATGCTCTGGAATAAGGCAACCATCTGGAAATTGTGTTGGGATTTCTCAATGAAAAAGGATAAGACTTGGATCAAATGGGTCCATGGTTACTACCCTGGTTTAGAGCAATCCCGAGAGGTTCCTAAACAAATCTCTTGGATGTTAAGGAAGATTTTGGAGAGTAAAGAGGAGATGGAAAATGCCTCAGGCAGCATCACACAGGGAAGTGTCAAGATTAGCAAATTTTATGAGATGCTGACTATGGATATTCCAAAGGTGAGGTGGTATAACTTGGTATGGACCAATTTTGCGAGACCAAGAGAAATTTATATCTTGGTTGTTTCTGTTACAAAAGCTAATGACAAAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140170.p2 GENE.S_Transcript_140170~~S_Transcript_140170.p2 ORF type:complete len:326 (+),score=50.28,RVT_1|PF00078.23|1.5e-05 S_Transcript_140170:3453-4430(+)
MEYLSKCLKEICDDPNFNFHPKCGRQGLTHLIFADDLMLFARGDIISVKLMQGAFGKFSKALGLHANMDKSTFFCGGLMEQDKNKILEMLNMKEGCMLVRYLGLPLSHKKLSVVQCMVIVDKVTARISSWTTRFLSYARRVQLVQSFIFGIHAFWAQIMLIPKKVLKMVEAMCWSFIWTGKASISRKALVAWDKVTIPKKNGGLGLMNLMLWNKATIWKLCWDFSMKKDKTWIKWVHGYYPGLEQSREVPKQISWMLRKILESKEEMENASGSITQGSVKISKFYEMLTMDIPKVRWYNLVWTNFARPREIYILVVSVTKANDKG*

Click here to download the sequence:
Link to NCBI Protein BLAST