Transcript Information: S_Transcript_140170.p4


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7742000823454
Replicate 21.7977087787605
Replicate 30.40983857963557
Condition 2: 8 Hour
Replicate 11.8955902504118
Replicate 21.9886087679757
Replicate 31.4210565069988
Condition 3: 24 Hour
Replicate 11.9417674213861
Replicate 21.1751606002551
Replicate 31.3078097098949


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140170.p4 GENE.S_Transcript_140170~~S_Transcript_140170.p4 ORF type:complete len:135 (+),score=19.13,zf-RVT|PF13966.2|4.1e-07,zf-RVT|PF13966.2|2.6e+03 S_Transcript_140170:4417-4821(+)
ATGACAAAGGATAGAATACAGAAATGGGAGCCTAATTGTGACACAGGGTGCTTACTTTGCAAGAGGGGGGAGGAAACATGTGAACATCTTCTTGTCCACTGCAACTTTAGCCAAAAAGTTCTAAGGATTCTGCTGAATTTCTTGAATGTTTCTTGGACTCCAGTTGGAACCTGGGAGTTAACAATTGAAAGGTGGCTGCTGCTAAGCAAAGGGAAGTCTCAGAAAGCGCAGTATGTTAGAGCCATCTTCACAGAAGTGTGCTATGCTGTGTGGTGGGAGCGAAATCAGAGGCATTTTAGACAACAGGAGAAGAGTGCTGAGCAGGTGGCACATACTATTCTGTATATAATCTATGTTAGAGCTCAGAATAGGAGTAAGACTGCTAAATTCCTAACTTGTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140170.p4 GENE.S_Transcript_140170~~S_Transcript_140170.p4 ORF type:complete len:135 (+),score=19.13,zf-RVT|PF13966.2|4.1e-07,zf-RVT|PF13966.2|2.6e+03 S_Transcript_140170:4417-4821(+)
MTKDRIQKWEPNCDTGCLLCKRGEETCEHLLVHCNFSQKVLRILLNFLNVSWTPVGTWELTIERWLLLSKGKSQKAQYVRAIFTEVCYAVWWERNQRHFRQQEKSAEQVAHTILYIIYVRAQNRSKTAKFLTCL*

Click here to download the sequence:
Link to NCBI Protein BLAST