Transcript Information: S_Transcript_140178.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3201077999901
Replicate 22.3759927215785
Replicate 32.3644533440514
Condition 2: 8 Hour
Replicate 12.7340243996324
Replicate 24.3596422990237
Replicate 33.1700491309972
Condition 3: 24 Hour
Replicate 13.4727763497868
Replicate 22.2082688202595
Replicate 32.5868763492427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140178.p2 GENE.S_Transcript_140178~~S_Transcript_140178.p2 ORF type:complete len:195 (+),score=18.80,zf-RVT|PF13966.2|8e+03,zf-RVT|PF13966.2|4.5e+03,zf-RVT|PF13966.2|9e-14 S_Transcript_140178:4044-4628(+)
ATGAGAATGGTTGAAGCTATTTGTAGAAGTTTTATTTGGACAGGGAAGGCCACTGTTTCTAGAAAGGCTTTGATAGCTTGGGAGAAAGTTACTACGCCAAAGAAATGTGGTGGATTAGGGTTAGTAAATTTGCTGTGTTGGAATAAAGCTTCCATTTACAAGCTTTGCTGGGAGTTTATAATAAAGAAGGATAAAGCTTGGATAAAGTGGCTTCATGAATATTATCCAGGGATTGACAACAATAGGCAAATCCCAAGAAATTTATCTTGGATGTTGAGGAAAATTGTGGAATTCAGAGGGGATGTGCACATGAAACAGGGCCATCTGCAGAAGGAAAAGCTAAAAATTAAAGATATCTACAGTCTGCTAATGGGGGATACACCGAAGGTCACTTGGTATAGTCTTGTACGGAAAACTTTTGCTAGACCAAGTGCCAAATTATTCCTTTGGTTATTAATCAATCAAAAGTTGACGACCAGAGATAGGATCAGGAAATGGGATGTGAGTTGCAATGCGACCTGTTTACTTTGTATAAAGGAAGATGAAAGTTGTGAGCATCTGTTTGTTATGCGTACCTATACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140178.p2 GENE.S_Transcript_140178~~S_Transcript_140178.p2 ORF type:complete len:195 (+),score=18.80,zf-RVT|PF13966.2|8e+03,zf-RVT|PF13966.2|4.5e+03,zf-RVT|PF13966.2|9e-14 S_Transcript_140178:4044-4628(+)
MRMVEAICRSFIWTGKATVSRKALIAWEKVTTPKKCGGLGLVNLLCWNKASIYKLCWEFIIKKDKAWIKWLHEYYPGIDNNRQIPRNLSWMLRKIVEFRGDVHMKQGHLQKEKLKIKDIYSLLMGDTPKVTWYSLVRKTFARPSAKLFLWLLINQKLTTRDRIRKWDVSCNATCLLCIKEDESCEHLFVMRTYT*

Click here to download the sequence:
Link to NCBI Protein BLAST