Transcript Information: S_Transcript_140417.p2


Annotated TAIR IDAT5G24060.2
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8130273-8133269 | Reverse length=494
E-Value6.5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 23.4473108683617
Replicate 33.0737893472668
Condition 2: 8 Hour
Replicate 14.4427896494027
Replicate 23.7286414399544
Replicate 33.5526412674969
Condition 3: 24 Hour
Replicate 17.2816278301981
Replicate 27.0824411176086
Replicate 34.9918629551792


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140417.p2 GENE.S_Transcript_140417~~S_Transcript_140417.p2 ORF type:3prime_partial len:96 (+),score=25.86 S_Transcript_140417:105-389(+)
ATGGATGAGAGAAAATTTGGATTTGGAGGCGGTGGCAGTAGTGGTGCCGGTGGGGGAGTGGTTGTTGTGGTTGGTGCCTTGGTGGAGGTCGTGACGGTGCTAGCAACACAGGGAAGGGAAGCTAGCTGTGATGGTGAAGAGAGGAGAGAAACTTGTACTCCTTGCAACTTCATGAAAACAAAAAAAAAAGAGGCCTCACTTATTGGCATAGACACCCTTGGTTTTGACTTGAGAGTTTGCTCTGGAACACAAGTACAAACTTTGCGGTTTGCATTCAATTCACGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140417.p2 GENE.S_Transcript_140417~~S_Transcript_140417.p2 ORF type:3prime_partial len:96 (+),score=25.86 S_Transcript_140417:105-389(+)
MDERKFGFGGGGSSGAGGGVVVVVGALVEVVTVLATQGREASCDGEERRETCTPCNFMKTKKKEASLIGIDTLGFDLRVCSGTQVQTLRFAFNSR

Click here to download the sequence:
Link to NCBI Protein BLAST