Transcript Information: S_Transcript_140419.p1


Annotated TAIR IDAT5G61240.2
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24629485-24631958 | Forward length=339
E-Value2.7E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.404450763285
Replicate 247.714105127397
Replicate 343.607071763935
Condition 2: 8 Hour
Replicate 141.366118566969
Replicate 241.980908742619
Replicate 343.209534452266
Condition 3: 24 Hour
Replicate 139.215513736127
Replicate 236.521503594415
Replicate 338.440826713822


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140419.p1 GENE.S_Transcript_140419~~S_Transcript_140419.p1 ORF type:complete len:332 (+),score=36.65,LRR_8|PF13855.2|8.5e-05,LRR_8|PF13855.2|7.7e-09,LRR_8|PF13855.2|1.2e-08,LRR_8|PF13855.2|3.4e-07,LRR_8|PF13855.2|1.9e-14,LRR_8|PF13855.2|4.7e+02,LRR_4|PF12799.3|5.4e-05,LRR_4|PF12799.3|2.1e-05,LRR_4|PF12799.3|1.6e-05,LRR_4|PF12799.3|0.00083,LRR_4|PF12799.3|0.00044,LRR_4|PF12799.3|0.00088,LRR_1|PF00560.29|2.2,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|0.41,LRR_1|PF00560.29|25,LRR_1|PF00560.29|0.75,LRR_1|PF00560.29|1,LRR_1|PF00560.29|5,LRR_1|PF00560.29|0.72,LRR_1|PF00560.29|1.4e+03,LRR_6|PF13516.2|6.3e+02,LRR_6|PF13516.2|7.4e+02,LRR_6|PF13516.2|48,LRR_6|PF13516.2|1.6e+03,LRR_6|PF13516.2|45,LRR_6|PF13516.2|3.3e+02,LRR_6|PF13516.2|5.8e+02,LRR_6|PF13516.2|1.3e+02 S_Transcript_140419:388-1383(+)
ATGTCGTCAATGTCGCATTTCCATTGGCCACCTACAATCTTACTTCTCTTACTCCCACTCCTCTTCAATCTCGCTTTCTGTAAAACCCTCAAACGTGACGTGAAAGCGTTGAACGAAATAAAGGCATCACTAGGATGGAGGGTTGTGTATTCGTGGGTTGGAGATGATCCTTGTGGTGATGGTGATTTGCCTCCTTGGTCCGGTGTAACTTGCTCGGTTCAGGGGGATTATAGAGTTGTTACTGAACTGGAAGTATATGCAGTGTCGATTGTTGGGCCCTTTCCCATTGCTGTGACTAATCTTTTGGATCTTCAGAGGCTGGACCTCCACAACAATAAGCTGACAGGGCAAATTCCTCCGCAGATTGGAAGATTGAAGCGTTTGAAAATACTGAATCTGAGATGGAATAAACTACAGGATGTCCTCCCCCCTGAAATAGGTGAACTGAAAAGTTTGACACATCTATATCTTAGCTTCAATAGTTTCAAGGGGGAGATTCCTCGGGAGCTGGCTAATCTTCCTGAACTGCGGTATTTATACCTACATGAGAACCGGTTCACTGGGCGAATTCCAGCAGAATTAGGCACTCTGCAAAATCTTAGGCATTTGGATGTTGGTAACAATCATTTAGTGGGCACAATTAGGGAGCTCATACGCATCGAAGGATGTTTCCCTGCCCTACGAAACCTTTATCTGAACAATAACTACTTGACGGGAGGAATTCCAGCTCAGCTGGCAAACTTAACTGACTTGGAGATATTGCATCTGTCCTACAACAAAATGACTGGTTTTATACCGTCTGCACTAGCACGTCTTCCTAGATTGACATACCTGTACTTGGATCACAATCAGTTCAGTGGGAGAATTCCTGATGCATTCTATAAACACCCGTTCTTGAAAGAAATGTACATTGAAGGCAACGCATTCAGGCAAGGTGTAAACCCCATAGGTGTTCACAAAGTCCTTGAAGTCTCAGACACAGAGTTCTTGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140419.p1 GENE.S_Transcript_140419~~S_Transcript_140419.p1 ORF type:complete len:332 (+),score=36.65,LRR_8|PF13855.2|8.5e-05,LRR_8|PF13855.2|7.7e-09,LRR_8|PF13855.2|1.2e-08,LRR_8|PF13855.2|3.4e-07,LRR_8|PF13855.2|1.9e-14,LRR_8|PF13855.2|4.7e+02,LRR_4|PF12799.3|5.4e-05,LRR_4|PF12799.3|2.1e-05,LRR_4|PF12799.3|1.6e-05,LRR_4|PF12799.3|0.00083,LRR_4|PF12799.3|0.00044,LRR_4|PF12799.3|0.00088,LRR_1|PF00560.29|2.2,LRR_1|PF00560.29|0.19,LRR_1|PF00560.29|0.41,LRR_1|PF00560.29|25,LRR_1|PF00560.29|0.75,LRR_1|PF00560.29|1,LRR_1|PF00560.29|5,LRR_1|PF00560.29|0.72,LRR_1|PF00560.29|1.4e+03,LRR_6|PF13516.2|6.3e+02,LRR_6|PF13516.2|7.4e+02,LRR_6|PF13516.2|48,LRR_6|PF13516.2|1.6e+03,LRR_6|PF13516.2|45,LRR_6|PF13516.2|3.3e+02,LRR_6|PF13516.2|5.8e+02,LRR_6|PF13516.2|1.3e+02 S_Transcript_140419:388-1383(+)
MSSMSHFHWPPTILLLLLPLLFNLAFCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPPWSGVTCSVQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLQRLDLHNNKLTGQIPPQIGRLKRLKILNLRWNKLQDVLPPEIGELKSLTHLYLSFNSFKGEIPRELANLPELRYLYLHENRFTGRIPAELGTLQNLRHLDVGNNHLVGTIRELIRIEGCFPALRNLYLNNNYLTGGIPAQLANLTDLEILHLSYNKMTGFIPSALARLPRLTYLYLDHNQFSGRIPDAFYKHPFLKEMYIEGNAFRQGVNPIGVHKVLEVSDTEFLV*

Click here to download the sequence:
Link to NCBI Protein BLAST