Transcript Information: S_Transcript_140467.p1


Annotated TAIR IDAT5G05970.2
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)NEDD1
Annotation TypeOrtholog
Chromosome Positionchr5:1795464-1799313 | Forward length=782
E-Value1.4E-299
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6212812977267
Replicate 23.398632537743
Replicate 33.1014100474348
Condition 2: 8 Hour
Replicate 13.5587942762866
Replicate 24.1067706745583
Replicate 33.2835708762487
Condition 3: 24 Hour
Replicate 12.7761790315389
Replicate 23.2002814806139
Replicate 32.7197069705132


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140467.p1 GENE.S_Transcript_140467~~S_Transcript_140467.p1 ORF type:complete len:779 (+),score=161.75,WD40|PF00400.28|8e+03,WD40|PF00400.28|1.4,WD40|PF00400.28|3,WD40|PF00400.28|0.17,WD40|PF00400.28|3.7e+03,WD40|PF00400.28|7.7e+02,WD40|PF00400.28|3.9e+03 S_Transcript_140467:229-2565(+)
ATGGCTTTACTGGCGGCCAGTGGTGGCGACACGGTCAAACTATTCGACGTATCAATTGAATCAGGCGATCCTTGCACGCTAAGTTACACCCCGTCTCCAGGTTTCCAAGTTAACTCCGTCAAGTGGAACCACACCAATTTGGTGGTTGCCAGTGCTGGGGACGATAAAAGGATTACATTGTGGCGTAAAAATGGGCAGAGTATGGGGACTATTCCTCCTTCCGGCTCCGATTCCGGTGACAACATTGAGGAGGCTATATCTTCAATTAACTTGAGCAACAAGACATCTAGATACTTGTGTTCTGGTGGTAGTGGTCAAGTCGTGAGAATTTGGGATCTGCAAAGGAAGCGTTGTATCAAATGGTTGAAAGGGCACACTGGTTCCATTTCAGGCGTGATGTACAATTGCAAAGATGAGCACTTAGCTTCTATTAGTGTAAATGGTGATCTCATTGTTCACAACCTTGCCTCTGGTGCAAGAGCTGCTGAATTGAAGGATCCTCATGAACAGGTGTTGAGAGCACTTGACTATTCTCGGGTTAGCCGGCATCTTTTGGCGACAGCTGGTGATGATGGATCTGTGCATATGTGGGATACGACCGGTAGAAGTCCTAAGGTATCGTGGTTGAAGCAACATTCAGCACCGACTGCTGATCTTAGTTTCTCCCCTTCCAATGATAAGATCATTGCTAGTGTTGGTTTGGATAAGAAGCTGCACACTTTTGACTGCGGTACAAGGAGGTCTTCATTTTGCATTTCTTATGAAGCACCATTTTCATCGTTAGCATACAGAGATGATGGATGGATATTGGCTGCTGGTACAAGTAATGGTCGCGTGGTATTTTATGATGTTCGTGGAAAACCTCAGCCTTTCACTGTTCTTCGTGCTTATGGTAATTCAGAGGCTGTTACAAGTTTATCTTGGCAGAGGTCAAAACCTATTGTGATAAATGAGAAAAATAGTACAGCTGAGGTTGCCCTCATAGGAGGGGCTGTTGAAGACTCAGTTTTGATGCCTGATCCACTTCCTTCAACAACTTCATCCAGTGTTTCACAAACCACAACACTGTCTGGTCCTCGGCGCACAAGTTCCGCTGTAGAACAGTCATCCTTCACTACAAGTGGTGAATCATTAACAAATTTGTCCTCTGCAGAGGAAACACCTCATAGAAGCTCACTTTGGGCAGGTGGGGTATTGCCAAGATTACATGCCACCCGAAGTTATAATTTCAAGGATGACATGGAGGTCTTTTCCCCGCTTGTGGATGTTCAGCCTATTACACCCTCACTTGATAAGCTCTGGAATGAGCCTGATGGATCTAGAAAAGATCAAGCTGGTGAAAAAAAGTCTTCACTGTTTCCCAATCGGAAATTCTCGATCACAGAAGGTGTCAATGATATACATCCAATATTTGACTGGAAACCTAGTTCAGCTTCTAAACAGGATGGCTCTAACTCTCCACTACCTGGATCCACTCCCAATGTGTCATCGAAAATTGATGATTTATCATCTATTACTCCTCCAGAAGCTTGGGGTGGTGAGAGGCTGCCAGATAAATTTGCTATTCATCGTCCAATGGGAACCTTGCCATCACGTTTTGGCATGTTATCTTCTAGTAGTACTTCAACTTCTATGTTCACTGGACTGCATGATCCATCTTCAGCAAGCCAGTACTCCACAAGTTTGAGTCTTCTTTCGGCAAATGTGCGAGCAAAAGACATCTCATCCGGTCAGGAAACTTCATCAGCAATACCAGGACATGTTCCTTTTAGCTCTCTCCCTTTGAATATTGGGCCAAAATCTGCTACCGGCTCGGGAAATCTGGAGTCTATTGGACCATCATCCTTGAATTTGTCTCGAAGATTCTCCACCTATGCTGGGAGGATAAGCACTTCCGCGTCATTTACTGATGTAGCTTCACCTCTGTTGAACTCACCAAAAACAAAGAAAACAGGAGCCGAGACCCGGGAAGAACTTCTCAACAGTCTGTTGTCAAGATCAGACACAGCTAATGCTGCTGAACCTGGGTTGCCTCAACCTGCCAATGGAGGAGCGTCACCTCTGCACCAGAGAACATCTCAAGGTGATCTTCAGCAAGGAACCTCATCCTTCACCCTTCAGCTATTTCAACATACACTTGATGAAACTCTCGGATCCTTCCAAAAATCAATCCATGAAGATGTGAGGAACCTCCACATTGAAATTCTAAGGCAATTCCATATGCAGGAGATGGAAATGTCAACAGCTATGAATTCAGTCCTAGAAAACCAAGCTGCACTTATGAAAGAAGTTCAGGCTCTACGGAAGGAAAATGAACGGCTTCGCCAATTACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140467.p1 GENE.S_Transcript_140467~~S_Transcript_140467.p1 ORF type:complete len:779 (+),score=161.75,WD40|PF00400.28|8e+03,WD40|PF00400.28|1.4,WD40|PF00400.28|3,WD40|PF00400.28|0.17,WD40|PF00400.28|3.7e+03,WD40|PF00400.28|7.7e+02,WD40|PF00400.28|3.9e+03 S_Transcript_140467:229-2565(+)
MALLAASGGDTVKLFDVSIESGDPCTLSYTPSPGFQVNSVKWNHTNLVVASAGDDKRITLWRKNGQSMGTIPPSGSDSGDNIEEAISSINLSNKTSRYLCSGGSGQVVRIWDLQRKRCIKWLKGHTGSISGVMYNCKDEHLASISVNGDLIVHNLASGARAAELKDPHEQVLRALDYSRVSRHLLATAGDDGSVHMWDTTGRSPKVSWLKQHSAPTADLSFSPSNDKIIASVGLDKKLHTFDCGTRRSSFCISYEAPFSSLAYRDDGWILAAGTSNGRVVFYDVRGKPQPFTVLRAYGNSEAVTSLSWQRSKPIVINEKNSTAEVALIGGAVEDSVLMPDPLPSTTSSSVSQTTTLSGPRRTSSAVEQSSFTTSGESLTNLSSAEETPHRSSLWAGGVLPRLHATRSYNFKDDMEVFSPLVDVQPITPSLDKLWNEPDGSRKDQAGEKKSSLFPNRKFSITEGVNDIHPIFDWKPSSASKQDGSNSPLPGSTPNVSSKIDDLSSITPPEAWGGERLPDKFAIHRPMGTLPSRFGMLSSSSTSTSMFTGLHDPSSASQYSTSLSLLSANVRAKDISSGQETSSAIPGHVPFSSLPLNIGPKSATGSGNLESIGPSSLNLSRRFSTYAGRISTSASFTDVASPLLNSPKTKKTGAETREELLNSLLSRSDTANAAEPGLPQPANGGASPLHQRTSQGDLQQGTSSFTLQLFQHTLDETLGSFQKSIHEDVRNLHIEILRQFHMQEMEMSTAMNSVLENQAALMKEVQALRKENERLRQLL*

Click here to download the sequence:
Link to NCBI Protein BLAST