Transcript Information: S_Transcript_140493.p1


Annotated TAIR IDAT5G34930.1
Annotated Gene Namearogenate dehydrogenase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13233391-13235522 | Forward length=640
E-Value2E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2447060711332
Replicate 20
Replicate 31.6019303057025
Condition 2: 8 Hour
Replicate 14.0371006168292
Replicate 22.4912971759161
Replicate 31.8989619247199
Condition 3: 24 Hour
Replicate 10.63247992289025
Replicate 22.3723811672346
Replicate 31.4605192751292


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140493.p1 GENE.S_Transcript_140493~~S_Transcript_140493.p1 ORF type:5prime_partial len:449 (+),score=86.93,PDH|PF02153.13|1.9e-17,F420_oxidored|PF03807.13|1.6e-09,NAD_binding_2|PF03446.11|8.7e-07,NAD_binding_2|PF03446.11|8.3e+03,2-Hacid_dh_C|PF02826.15|3.4e-06 S_Transcript_140493:3-1349(+)
TCTCTCTCTTCCTCTCACTCAAACCTGTCTCTCTGCAACCACGATAACCTCATCTCTCTGCACCCTAGCCTTTCCTTCTTGATGTCCCCGCCTCAAGCCAGCGTACCAGCCGCCACCACCACCACCACCAACCTTTGCCCACAACCCCAACAGCAGTGTTTTCTCTCTCCTCCACGTCATCACCTATCTTTCACACCCCTTTCTCTCAATCGTAAACCCCTTTGTGTTCGTTGCTCCACTTCTTCTCCTACTAATGGAAATCATCATAATTCTGCTGACATCTTTAGTGGTGGCCTTTTTAATGGACCGTTTTCATGTCCTGATAAAAATGTTAATATTAATGATGATATGATCAAAACCAAGGAAAATAATAATAATAATAAAACTAAGCTCAAGATAGCAATAGTTGGGTTTGGAAATTTTGGTCAGTTTTTGGCAAAGACTATGGTGAAGCAAGGTCATACTGTGTTGGCTTATTCAAGGTCTAATTACTCTCGTGCTGCTAATGAGATTGGTGCTCAGTTTTTCAATGATGCTGATGATCTTTGTGAAGAACATCCTGAGGTAATCCTACTATGCACATCAATTTTATCAACAGAGAAAGTACTCAAATCACTCCCCCTCAGCCGCTTACGTCGGTCCACCCTCATTGCTGACGTACTCTCGGTCAAAGAATTTCCTCGAACTCTGTTCCTCCAAACCCTACCCCCGGAATTCGACATCCTCTGCACCCACCCGATGTTTGGGCCAGACTCGGGCAAGATCAGCTGGGCCGGGCTCCCCTTTGTCTTCGACAAGGTCCGTGTTGGGTCTGACCCAGCCCGAGTCGAGGCTTTTCTAGACATCTTCCAGAGTGTTGGGTGTAGGATGGTGGAAATGACCTGTGCTGACCATGACAAGCATGCGGCCGGGTCACAGTTCATAACCCACATGATGGGCCGGGTATTGGAGAAGTTGGGCCTTGAAAACACACCAATTAACACCAAAGGGTATGAGAGTTTGTTGAATTTGGTGGATAATACAGCAAGGGATAGCTTTGAGCTTTTTTATGGGCTTTTTTTGTACAACAAGAATGCAATGGAGCAGCTTGATAGAATGGATTGGGCTTTTGAGATGGTTAAGAAGCAACTTTCTGGATACTTGCATGGGCTTGTGAGAAAACAGTTGATGTTGGAAACTACTGGTAGTAATTCTAGTAGTGATCATGCTGACGTCATAAATGGGAATAATAATGATAATACTGACAAGAAATTGATGCTTCCTTCTCCAAGTGCTAAAGTTGTGGTGCCACCTTCAGAGCTTGATGGTACAGAGCAGCCAGATTTGGTGATTGTCAATGGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140493.p1 GENE.S_Transcript_140493~~S_Transcript_140493.p1 ORF type:5prime_partial len:449 (+),score=86.93,PDH|PF02153.13|1.9e-17,F420_oxidored|PF03807.13|1.6e-09,NAD_binding_2|PF03446.11|8.7e-07,NAD_binding_2|PF03446.11|8.3e+03,2-Hacid_dh_C|PF02826.15|3.4e-06 S_Transcript_140493:3-1349(+)
SLSSSHSNLSLCNHDNLISLHPSLSFLMSPPQASVPAATTTTTNLCPQPQQQCFLSPPRHHLSFTPLSLNRKPLCVRCSTSSPTNGNHHNSADIFSGGLFNGPFSCPDKNVNINDDMIKTKENNNNNKTKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSNYSRAANEIGAQFFNDADDLCEEHPEVILLCTSILSTEKVLKSLPLSRLRRSTLIADVLSVKEFPRTLFLQTLPPEFDILCTHPMFGPDSGKISWAGLPFVFDKVRVGSDPARVEAFLDIFQSVGCRMVEMTCADHDKHAAGSQFITHMMGRVLEKLGLENTPINTKGYESLLNLVDNTARDSFELFYGLFLYNKNAMEQLDRMDWAFEMVKKQLSGYLHGLVRKQLMLETTGSNSSSDHADVINGNNNDNTDKKLMLPSPSAKVVVPPSELDGTEQPDLVIVNGR*

Click here to download the sequence:
Link to NCBI Protein BLAST