Transcript Information: S_Transcript_140496.p1


Annotated TAIR IDAT5G34930.1
Annotated Gene Namearogenate dehydrogenase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13233391-13235522 | Forward length=640
E-Value3.1E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.709720543479
Replicate 219.072055861941
Replicate 32.6229669096676
Condition 2: 8 Hour
Replicate 19.8096795458812
Replicate 210.688772127869
Replicate 317.715837787251
Condition 3: 24 Hour
Replicate 11.1650604528317
Replicate 22.3167451833599
Replicate 32.3540574778108


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140496.p1 GENE.S_Transcript_140496~~S_Transcript_140496.p1 ORF type:5prime_partial len:450 (+),score=84.93,PDH|PF02153.13|1.9e-17,F420_oxidored|PF03807.13|1.6e-09,NAD_binding_2|PF03446.11|8.7e-07,NAD_binding_2|PF03446.11|8.3e+03,2-Hacid_dh_C|PF02826.15|3.6e-06 S_Transcript_140496:3-1352(+)
GCTCTCCGCTTCCCATTCTCTCTCCTCTCACCAGCCCAAGTGCCCAACACTTTTTTTTTCCAAAAACAAAAAAGCAAAAGAAAAATGATTTCTCTATCCTCATACACAGCCACCGCCACCACCGCCACCACCACCACCAAAATTTGCCCACAACCCCAACAGCATTGTTTTCTCTCTCCTCCACGTCATCACCTCTCTTTCACACCCCTTTCCCTCAATCGTAAACCCCTTTGTGTTCGTTGCTCCACTTCTTCTCCTACTAATAGAAATCATCATAATTCTGCTGAAATCTTTAATGGTGACCTTTTTAATGGACCGTTTTCATCTTCTGATAAAAATGTTAATATTAATGATGATATGATCAAAACTAAGGAAAATAACAATAAGAAGAAGCTTAAGATAGCAATAGTTGGGTTTGGAAATTTTGGTCAGTTTTTGGCAAAGACTATGGTGAAGCAAGGTCATACTGTGTTGGCTTATTCAAGGTCTAATTACTCTCGTGCTGCTAATGAGATTGGTGCTCAGTTTTTCAATGATGCTGATGATCTTTGTGAAGAACATCCTGAGGTAATCCTACTATGCACATCAATTTTATCAACAGAGAAAGTACTCAAATCACTCCCCCTCAGCCGCTTACGTCGGTCCACCCTCATTGCTGACGTACTCTCGGTCAAAGAATTTCCTCGAACTCTGTTCCTCCAAACCCTACCCCCGGAATTCGACATCCTCTGCACCCACCCGATGTTTGGGCCAGACTCGGGCAAGATCAGCTGGGCCGGGCTCCCCTTTGTCTTCGACAAGGTCCGTGTTGGGTCTGACCCAGCCCGAGTCGAGGCTTTTCTAGACATCTTCCAGAGTGTTGGGTGTAGGATGGTGGAAATGACCTGTGCTGACCATGACAAGCATGCGGCCGGGTCACAGTTCATAACCCACATGATGGGCCGGGTATTGGAGAAGTTGGGCCTTGAAAACACACCAATTAACACCAAAGGGTATGAGAGTTTGTTGAATTTGGTGGATAATACAGCAAGGGATAGCTTTGAGCTTTTTTATGGGCTTTTTTTGTACAACAAGAATGCAATGGAGCAGCTTGATAGAATGGATTGGGCTTTTGAGATGGTTAAGAAGCAACTTTCTGGATACTTGCATGGGCTTGTGAGAAAACAGTTGATGTTGGAAACTACTGGTAGTAATTCTAGTAGTGATCATGCTGACGTCATAAATGGGAATAATAATGATAATACTGACAAGAAATTGATGCTTCCTTCTCCAAGTGCTAAAGTTGTGGTGCCACCTTCAGAGCTTGATGGTACAGAGCAGCCAGATTTGGTGATTGTCAATGGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140496.p1 GENE.S_Transcript_140496~~S_Transcript_140496.p1 ORF type:5prime_partial len:450 (+),score=84.93,PDH|PF02153.13|1.9e-17,F420_oxidored|PF03807.13|1.6e-09,NAD_binding_2|PF03446.11|8.7e-07,NAD_binding_2|PF03446.11|8.3e+03,2-Hacid_dh_C|PF02826.15|3.6e-06 S_Transcript_140496:3-1352(+)
ALRFPFSLLSPAQVPNTFFFQKQKSKRKMISLSSYTATATTATTTTKICPQPQQHCFLSPPRHHLSFTPLSLNRKPLCVRCSTSSPTNRNHHNSAEIFNGDLFNGPFSSSDKNVNINDDMIKTKENNNKKKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSNYSRAANEIGAQFFNDADDLCEEHPEVILLCTSILSTEKVLKSLPLSRLRRSTLIADVLSVKEFPRTLFLQTLPPEFDILCTHPMFGPDSGKISWAGLPFVFDKVRVGSDPARVEAFLDIFQSVGCRMVEMTCADHDKHAAGSQFITHMMGRVLEKLGLENTPINTKGYESLLNLVDNTARDSFELFYGLFLYNKNAMEQLDRMDWAFEMVKKQLSGYLHGLVRKQLMLETTGSNSSSDHADVINGNNNDNTDKKLMLPSPSAKVVVPPSELDGTEQPDLVIVNGR*

Click here to download the sequence:
Link to NCBI Protein BLAST