Transcript Information: S_Transcript_140528.p1


Annotated TAIR IDAT5G13980.1
Annotated Gene NameGlycosyl hydrolase family 38 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4508626-4514334 | Forward length=1024
E-Value7.9E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 21.225710530973
Replicate 32.5614911227223
Condition 2: 8 Hour
Replicate 12.9618597662685
Replicate 23.4179213199582
Replicate 33.1085611090598
Condition 3: 24 Hour
Replicate 12.8823110161201
Replicate 21.573875803913
Replicate 31.7515308614664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140528.p1 GENE.S_Transcript_140528~~S_Transcript_140528.p1 ORF type:5prime_partial len:144 (-),score=18.69,Glyco_hydro_38|PF01074.18|5.7e-08 S_Transcript_140528:86-517(-)
GTGCTGGATATGGGGCAACATTTTATGGGTGTTTCTGTTTTCCTTTTCATACTTGTAATTGGTTGTTCCTGTGGGTCAATCAGTTGTATCAAATACAAAACTGGTGCCCGTCTTGTCAAAGATAAGTTGAATGTTCATCTTGTTCCACATTCACATGACGATGTAGGGTGGTTGAAAACAATTGATGAGTACTATGTTGGATCTAATAATAGCATTCAGGTTGCAACCATGGTTGTCTCTTTTTTTGTTTGCAAGCATGTAGCCATTTTTGGCTGTTGGATCATTTCTTCTTTCTGTCTTTCTTTCTTTCTTTCTTTTATCTTGTTCATTTTGCTCTTTTCTTCTTCCATTTGTGTATGGCAGTGTGTGTTTGCATATGCATGTGCTTCCATGTCTGTTGTGTGCTTGTGTGCGTGCGTGATGTGCACGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140528.p1 GENE.S_Transcript_140528~~S_Transcript_140528.p1 ORF type:5prime_partial len:144 (-),score=18.69,Glyco_hydro_38|PF01074.18|5.7e-08 S_Transcript_140528:86-517(-)
VLDMGQHFMGVSVFLFILVIGCSCGSISCIKYKTGARLVKDKLNVHLVPHSHDDVGWLKTIDEYYVGSNNSIQVATMVVSFFVCKHVAIFGCWIISSFCLSFFLSFILFILLFSSSICVWQCVFAYACASMSVVCLCACVMCT*

Click here to download the sequence:
Link to NCBI Protein BLAST