Transcript Information: S_Transcript_14056.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value1E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.67103282016
Replicate 216.238213114331
Replicate 318.737819860938
Condition 2: 8 Hour
Replicate 127.467102728467
Replicate 221.29799990502
Replicate 324.385329660099
Condition 3: 24 Hour
Replicate 117.301147724551
Replicate 216.861875812802
Replicate 319.370530103129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_14056.p1 GENE.S_Transcript_14056~~S_Transcript_14056.p1 ORF type:complete len:125 (+),score=28.34,Sigma70_r3|PF04539.12|1.7e-18,Sigma70_r3|PF04539.12|7.6e+03 S_Transcript_14056:1386-1760(+)
ATGGTTGAGGCAACTTATAGAGTAAAAGAAGCAAGGAAACAACTTTATAGCGAAAATGGAAGGCAGCCTGATAATGAGGAAGTTGCAGAGGCAACGGGGCTCTCAATGAAGAGGCTAAATGCTGTGCTTTTGACCCCCAAGGCTCCAAGGTCGCTCGACCAGAAGGTTGGGATGAATATGAATCTTAAACCCTCGGAAGTGATTGCAGACCCTGAAGCAGAAACTGCTGAGGACTTACTGACCAAGCAGTTCATGAAGCAGGATCTCGAGAAGGTGCTCGATACACTCAGTTCGATGGAGAAGCAGGTGATAAGATGGAGATTCGGACAATTGTCCATATATTCTCTTGGTTTTTATCACTTTGAGGCAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_14056.p1 GENE.S_Transcript_14056~~S_Transcript_14056.p1 ORF type:complete len:125 (+),score=28.34,Sigma70_r3|PF04539.12|1.7e-18,Sigma70_r3|PF04539.12|7.6e+03 S_Transcript_14056:1386-1760(+)
MVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKVGMNMNLKPSEVIADPEAETAEDLLTKQFMKQDLEKVLDTLSSMEKQVIRWRFGQLSIYSLGFYHFEAK*

Click here to download the sequence:
Link to NCBI Protein BLAST