Transcript Information: S_Transcript_140730.p1


Annotated TAIR IDAT5G04320.2
Annotated Gene NameShugoshin C terminus
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1209613-1212376 | Forward length=470
E-Value2.2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.559352102991
Replicate 24.6260687781886
Replicate 33.4505764285446
Condition 2: 8 Hour
Replicate 14.9529938801083
Replicate 25.4847112794169
Replicate 37.3574054636548
Condition 3: 24 Hour
Replicate 12.4663578134542
Replicate 23.5823444104549
Replicate 34.9630474474583


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_140730.p1 GENE.S_Transcript_140730~~S_Transcript_140730.p1 ORF type:complete len:310 (+),score=90.25 S_Transcript_140730:238-1167(+)
ATGATGAAGGGAGAGAAAATGGTGAAGAGATCGTCATTTGGGACTATTAGGAAGAGACTTTCTGATATCACTAACTTGAATTCTCAATACAGATCCCCTGCTAAGGACAAAGAAAATGCTCCTGCTTCTTTTGATGGCTCTTCCTCTAAAAATTACATCGAACTGCTTCGTAAGGAAAATGCTGAGATGATGAAAGCTATCCAAGAGAGAGACAAAACTATAGAAGCAAATGCAATTGAGATGCAGAAACTGAGAGGTTTGATTCAGAAAATACAGCTGCAGAATTGGCAACTTGCTCAATCCAACAGCCAGATGTTAGCGGAGCTTAATGTGGGTAAAGATAGGTTGAAAGCTCTAAACCATGAGCTTGCTTGCAAGGATGCCTTGTTCAAAGCAAAGTTGGTGGAATTGGAGGAAAAAGCAAAGATGCAATGCCCAACTGATAAAGCACAGGAAAGGGAGCCTACACCTGAGAAAGAAGCTGCAGCAGATCACCAGCTGCAGACCAACAAGAATGACGAGGAGAAAGATCCCAAAAACAAAAAAAGACGTCCTGCAAGAAGCCGATCCATGGGTCCTACAACATCTCAACAAGCTGCTGACAAAGAGATGGCTGAAAGCAAAAGGCACTGTCTGAGAAGACAATCTGTCAGGCTAAAGGAACATCAGGAGTCGCAAACACAGGTTGACTTGTTCGAGATAGATGTAGCTAATTTTCCTGCCAGTCATCCTCAGCTCACGGACAAATCACTACCTAAATCAAATTTAGATATGACTGACAAGAAGGAGGAGGAGGGGGGCCTCGAACGACCATCAAATGCCTTGGAATCAGAAAGATCATCGATAGGAAGGCCACTGCGTAGAGCAGCTGCAAAAAGGGGTTCATACACAGAACCTCGCCTTAATGTGAAATTGAGGAGACCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_140730.p1 GENE.S_Transcript_140730~~S_Transcript_140730.p1 ORF type:complete len:310 (+),score=90.25 S_Transcript_140730:238-1167(+)
MMKGEKMVKRSSFGTIRKRLSDITNLNSQYRSPAKDKENAPASFDGSSSKNYIELLRKENAEMMKAIQERDKTIEANAIEMQKLRGLIQKIQLQNWQLAQSNSQMLAELNVGKDRLKALNHELACKDALFKAKLVELEEKAKMQCPTDKAQEREPTPEKEAAADHQLQTNKNDEEKDPKNKKRRPARSRSMGPTTSQQAADKEMAESKRHCLRRQSVRLKEHQESQTQVDLFEIDVANFPASHPQLTDKSLPKSNLDMTDKKEEEGGLERPSNALESERSSIGRPLRRAAAKRGSYTEPRLNVKLRRPE*

Click here to download the sequence:
Link to NCBI Protein BLAST